Protein

View in Explore
Genbank accession
CAB4188798.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence Phold
Probability 1,00
Protein sequence
MQGTTPLSVQVTEGSTGLQGLSGIQGPIGLQGPNAAITFAPTPPGSPLLGDRWMDSNTGIEYTWVYDGNTYQWVEVAASGFVGAQGTQGIQGFGFAQLQGATGTQGTTGTQGLTGTQGTTGTQGAVGTTGTQGTQGIQGIQGLSIQGTQGLQGTQGLQGVQGTQGTQGIQGTQGLQGTFVQGTQGIQGSQGVQGVQGTQGLQGTTGSQGLTGDAGIQGTTGSTGLQGTQGLQGTDGIQGTDGLQGIIGNSALWNFTGAYSGGVSYAIGDVATYLGETWYRIHSNGGNLGDTPVEGTFWTLLAAHGVQGIQGVQGADGTQGTTGSQGLDGTQGTVGSQGLDGTQGTDGTQGTEGAVGSQGIVGAQGLDGIQGAVGAEGSFGGITVPYYYDDVTTMSDPGDNNARFNNANPTLVTHLALDDNPVDGNYDVSNFLTTIDDSTSTIKGHVKVSRKFDTATFALFTISGVTDSAPNWFDVEVAYVSGQGAFTDGEELLFTFARTGDIGATGAQGANGTQGLDGTQGTTGAQGTVGSQGLDGTQGTDGTQGIEGSQGAQGTVGSQGLDGTQGAVGSQGTVGSQGLDGTQGTVGSQGTVGSQGLDGTQGTDGTQGTQGTLGNTGSQGTQGTLGDTGTQGLIGTQGTLGATPSLSTTTPNGLGTAAAGVGTNASADDHVHSSVVLPVATTSVGLIVKGLASQTANLQEWQDSTGAIVAAMWSSGTFSTAGRVSIGNGSSGAKLDVLIASSTQLGLVVKGVISQTANLQEWQNSAGTASAYVTSGGSLKANSIRANTVSYLGVIGAVSTVATDIGIVVRGAASQTGDLQQWQNSAGTVLTGITSAGQLYTTQRMTVGLSAISSLGNLVVSTADAARVGVVVAGVASQTANLQEWQNSAGTVLASIDPNGQLRTPQILNVASFNNSRLQMTSTGALFDVGVTTNVVLRVKGAASQTANLQEWQDSAGSVPLWVTGDLGKLNSISGVSFSNNYSGGTTLTTRSAYPSLIPLIVKGAASQTANLQEWQNSAGTVLSSITSTGLMNTTVGLNANALYIGNGYLGANIQSAFSASTASYVPIVVRGAPSQTANLQEWQTSGGTVQSRIDQYGQVVSSVSSYLSTLYAGSGISGSVGQANVSPFAASTIGLVVRGAASQTADLQEWQNSAGTALVSIDSNGILKSAYLTNVANNGSYFNFTVGTALLYSRNIASPTFAVVGVASQTADLQEWQDSAGTVLAKVTAAGAAQFVSIDGGSA
Physico‐chemical
properties
protein length:1244 AA
molecular weight: 123731,26800 Da
isoelectric point:4,15569
aromaticity:0,05707
hydropathy:-0,08087

Domains

Domains [InterPro]
IPR050938
14–385
IPR050938 IPR008160 IPR008160
IPR008160
182–240
IPR008160 IPR008160
CAB4188798.1
1 1244
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4188798.1 [NCBI]
Genbank nucleotide accession
LR797127 [NCBI]
CDS location
range 60666 -> 64400
strand +
CDS
GTGCAGGGTACTACTCCTCTTTCTGTACAAGTCACTGAGGGCTCTACTGGTCTACAAGGATTGTCTGGAATACAAGGGCCTATAGGACTTCAAGGGCCTAATGCAGCCATAACTTTTGCTCCCACACCCCCTGGCTCACCTCTTCTTGGCGACCGCTGGATGGATTCTAATACAGGCATTGAGTACACATGGGTATACGACGGCAACACCTATCAATGGGTAGAAGTAGCCGCAAGCGGTTTTGTAGGAGCTCAGGGAACTCAAGGTATACAAGGCTTTGGCTTTGCCCAACTTCAAGGCGCAACCGGTACCCAAGGTACAACTGGAACACAGGGACTAACTGGTACACAAGGTACAACTGGTACACAGGGTGCTGTGGGTACAACTGGCACACAAGGTACACAAGGCATTCAAGGTATTCAAGGATTATCTATTCAAGGAACACAGGGTCTACAAGGAACTCAAGGCTTACAAGGTGTGCAGGGAACTCAAGGAACTCAAGGCATCCAAGGTACTCAAGGCTTACAGGGTACGTTTGTACAAGGTACTCAAGGTATTCAGGGCTCTCAAGGTGTACAAGGTGTTCAAGGAACTCAAGGTCTACAAGGAACAACTGGTTCACAAGGATTAACTGGTGATGCAGGAATCCAAGGTACAACTGGTAGTACTGGTTTACAAGGCACCCAAGGACTCCAAGGTACTGACGGAATCCAAGGCACTGATGGACTACAAGGCATTATAGGTAACAGCGCACTTTGGAATTTTACTGGGGCATATAGTGGTGGAGTATCCTATGCTATAGGAGATGTAGCAACATACCTCGGTGAGACTTGGTACCGAATCCACTCCAACGGTGGAAACCTTGGCGATACTCCAGTTGAGGGTACCTTCTGGACACTTCTTGCTGCCCATGGGGTACAAGGTATACAAGGCGTACAAGGCGCTGACGGTACTCAAGGAACTACAGGTAGCCAAGGTCTTGACGGAACTCAAGGAACTGTTGGAAGTCAGGGACTAGACGGTACCCAAGGTACAGATGGTACTCAAGGTACTGAAGGCGCTGTAGGTTCACAAGGTATCGTAGGTGCTCAAGGTCTAGACGGTATTCAAGGAGCAGTAGGTGCTGAAGGTTCATTCGGCGGTATCACAGTTCCTTATTACTATGATGACGTTACAACTATGTCAGACCCAGGCGACAACAATGCTCGTTTTAATAATGCCAACCCAACTCTAGTTACACACCTCGCATTAGATGATAATCCTGTTGATGGTAACTATGACGTTTCTAATTTCCTAACCACTATTGATGACTCTACTTCAACAATCAAGGGTCACGTAAAGGTTTCTAGAAAATTTGATACGGCTACTTTTGCACTCTTCACAATCTCTGGTGTTACAGATTCAGCGCCAAATTGGTTTGATGTAGAAGTTGCTTATGTTTCTGGTCAAGGAGCATTTACTGACGGAGAAGAACTTCTCTTTACATTTGCTCGTACTGGTGACATTGGTGCTACTGGTGCTCAGGGTGCTAATGGTACCCAGGGTCTAGACGGTACTCAAGGAACTACAGGTGCACAAGGCACCGTTGGTAGCCAAGGCCTAGATGGAACTCAGGGAACTGATGGCACACAAGGTATTGAAGGTAGCCAAGGTGCTCAAGGAACTGTAGGTAGCCAGGGTCTAGATGGAACTCAGGGAGCAGTAGGTTCTCAAGGAACTGTTGGAAGCCAAGGCTTAGATGGTACCCAGGGTACAGTCGGTAGCCAAGGAACTGTTGGAAGCCAAGGTCTTGACGGAACACAGGGAACTGATGGAACTCAAGGTACTCAGGGAACTTTAGGAAATACTGGTAGCCAAGGTACTCAGGGTACTTTAGGCGACACTGGTACGCAAGGCTTAATAGGTACACAAGGTACTTTGGGAGCAACCCCATCTCTATCCACTACCACTCCAAACGGATTAGGGACCGCCGCCGCTGGCGTTGGTACTAACGCATCTGCAGATGACCACGTTCACTCATCTGTGGTTTTACCTGTGGCGACTACTTCAGTAGGTTTAATTGTTAAGGGTTTAGCATCACAAACTGCCAACCTACAAGAATGGCAGGATAGTACTGGAGCAATAGTTGCCGCCATGTGGAGCAGTGGAACTTTTTCAACCGCAGGAAGAGTGTCAATCGGCAATGGTTCCTCTGGTGCAAAACTAGATGTGTTAATAGCATCAAGTACACAATTAGGATTGGTTGTTAAAGGAGTTATATCACAAACCGCCAACCTTCAAGAGTGGCAGAATAGTGCTGGTACTGCTTCTGCTTATGTAACTTCAGGTGGAAGTTTGAAGGCAAACAGTATTCGCGCAAATACGGTTTCGTATCTCGGTGTTATTGGCGCTGTATCAACAGTTGCTACAGATATAGGAATTGTTGTTCGTGGCGCAGCCTCACAGACTGGAGACTTACAACAGTGGCAGAACTCTGCTGGGACGGTATTAACAGGCATTACTTCCGCTGGACAACTCTATACAACTCAACGAATGACAGTAGGGCTCTCTGCTATATCTTCTCTTGGTAATTTAGTAGTTAGTACTGCCGACGCCGCAAGAGTTGGAGTTGTAGTTGCAGGTGTTGCATCTCAAACCGCTAACCTTCAAGAGTGGCAGAATAGTGCTGGGACGGTGTTGGCTAGCATTGACCCTAATGGACAATTAAGAACACCACAGATTTTAAATGTGGCTTCTTTCAACAACTCTCGCTTACAAATGACTAGCACTGGTGCATTGTTTGATGTTGGTGTGACTACCAATGTGGTTTTGCGTGTCAAAGGCGCAGCCTCCCAAACCGCCAACCTGCAGGAATGGCAGGACAGTGCTGGAAGTGTACCTTTATGGGTTACAGGTGACTTAGGTAAATTAAACAGCATCTCAGGAGTTAGTTTTAGTAATAATTATTCAGGCGGTACGACACTTACTACAAGAAGTGCCTATCCCTCCCTCATACCATTAATAGTCAAAGGCGCCGCCTCTCAAACTGCCAACCTTCAAGAGTGGCAGAATAGTGCTGGGACTGTATTAAGCAGTATTACTTCAACAGGTTTAATGAACACTACTGTTGGACTAAATGCTAACGCTCTTTATATCGGCAATGGATATTTAGGTGCAAACATACAATCTGCATTTTCCGCATCAACGGCTTCCTATGTACCAATTGTGGTTCGTGGCGCACCCTCCCAAACTGCCAACCTACAAGAATGGCAGACCAGCGGTGGAACAGTTCAAAGCAGGATTGACCAATACGGTCAAGTTGTTTCTTCGGTTTCGTCATACCTTTCTACGCTGTATGCTGGCAGTGGAATCTCAGGTTCGGTGGGTCAAGCCAATGTTAGTCCTTTTGCTGCGTCAACGATTGGTTTAGTAGTCAGAGGCGCAGCCTCCCAAACTGCAGACCTACAAGAGTGGCAGAATAGTGCGGGTACTGCGTTAGTATCTATAGATTCCAACGGTATATTAAAATCAGCATACTTAACTAATGTCGCCAATAATGGAAGTTATTTTAACTTTACTGTTGGAACAGCACTACTATACTCACGCAACATCGCTTCACCCACTTTCGCGGTAGTTGGTGTTGCCTCCCAAACTGCAGACCTACAAGAATGGCAAGATAGTGCTGGGACGGTGCTGGCTAAGGTAACAGCCGCAGGAGCGGCACAGTTTGTCTCCATAGATGGAGGCTCAGCATGA

Tertiary structure

PDB ID
2af32daf7d7ed361b4710c5d9c3415021b9f0f7d588e0abbac83b1e36834cf58
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2318
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50