Protein

View in Explore
Genbank accession
QYC52947.1 [GenBank]
Protein name
long tail fiber proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,52
TF
Evidence RBPdetect2
Probability 0,69
Protein sequence
MSDLLKQHFRATNGLDAGGNKVINVALADRNVKTDGVSVEYVIQENTIQKYDPTRGYLTDFAVTYGRRIWIANKDIPKPAGDFNQANWTSLRVDPNWIYTVRKGEFEIQSGQFINVDSNAAGNATLLLPLAPDEGDTIVVRDIGGRPGYNGILIKAQDTGASIVFGESRLREVRLTRPYSQIMLTFSNGAWRASLTDFGDTAKMVVPNGIVPTQVQSGDNVVRRYTSNSEIFITLPLFANSNDIINFTDLDGTSPINHMTVRTFDPTISIGTPGQTEVQVRTSGTGFLVYDSIDKIWRIFENDLRTRVRIITSDVTLMPNEHISVFGADNNTVKTINVTLPTDVAVGDTVTIAMNYMRKGQTVVIKASDGDTIASNLNLLQFPKRSEYPPDAAWVQSSSITFNGTTSYVPVLGLAYIEDKASGKSYWIVTESDPTVERVDAKDNTTRARLGVIALATQAQANAESNPEKELAITPETLNGRRSTETQTGIARIATSSEVNQSTTASYLDNVIVTPKKLNERSATETRRGLAEIATNAKMDAGTDDFTIVTPKKLLYRTTSDSRLGVIQLVKTGGAPNTTADRSSAGTGIFDHSDYKNAVTPKTLREYKATVNQSGIVWLATDSEVRNGTPASSNIPTVVTPEALHKKVATDGAIGLIQIATQTEVNAGGVTNKAVTPKTLNDRTATNDRTGIARFATPGAQGEFEAGTSSTVMVNPKLLFDKFANTDRIQVNTSSGLTITGNLWDHYTINIQEASTSQRGTTTLATAAEVRTGTDAKKIVTAATLHAKTATEGAIGLAQYATQAQVDAGTLSDRIVPPAYLKQTIQVTESWQATDSVRGTVRLSTGDGTWKGNDTNGSTLPDNGYASKGVAVSPYELNLTLKHYLPRLGKAYDTGMLGGQTPDKYARRDIAQTISGAWTFSQDTSFSNNISVQNIIYANGGEVKISPTADTGNVHVRFQNRDGSERGIIYAEPQTASAGTLKVRVKNGTGTTAASQTYTFGGNGTLEVPNEVSTKTLRSSGNAIVGGTVMVKDVQMLAVEGLNSIFGAQSQSAFIRSRDADTQIFAQDSTGSYPILTTKNYARLADGRYVKKAGDTMTGNLNISGSAIVITGSESWYVPTNETVIRQGSWTAEIKDATKLKGLRGYMVPIRTPIDPANPSTLVVTGYEEKTAAGGVLTQVGVTTNNTYQLWTPYPPTTETADKRFAHTVWMRIYNPNLNKFDDWMRVFTSATPPTAADIGAPSSVSTQVKTLEVLEWIKLGPVKIWPDRPNQTLKFEWVGD
Physico‐chemical
properties
protein length:1281 AA
molecular weight: 138452,25710 Da
isoelectric point:6,85765
aromaticity:0,07182
hydropathy:-0,33310

Domains

View on InterPro
Domain architecture
QYC52947.1
1 1281 aa
ATT 1127–1228 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
QYC52947.1
1 1281 aa
Domain Start End Length (AA) Confidence
N-terminal 1 844 844 0,8729
Central domain 845 1043 200 0,2425
C-terminal 1044 1281 237 0,6388
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Klebsiella phage vB_KpnM_TU02 [NCBI] · taxon 2863278
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Klebsiella pneumoniae [NCBI] · taxon 573
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
QYC52947.1 [NCBI]
Genbank nucleotide accession
MZ560702 [NCBI]
CDS location
range 137078 -> 140923
strand +
CDS
ATGAGCGATTTACTGAAACAACATTTCCGTGCAACGAACGGCTTGGACGCAGGCGGAAATAAAGTTATAAATGTGGCACTAGCTGACCGCAACGTTAAAACCGACGGCGTCTCCGTCGAGTACGTTATTCAAGAAAACACTATCCAAAAATATGACCCGACGCGTGGGTATCTCACCGATTTTGCTGTGACTTATGGACGTCGTATCTGGATTGCAAATAAAGATATTCCAAAGCCTGCTGGAGATTTTAACCAGGCGAATTGGACTTCTTTACGTGTTGACCCGAACTGGATTTATACCGTCCGTAAAGGAGAGTTTGAAATTCAATCTGGTCAGTTCATCAACGTTGACTCTAACGCTGCAGGTAATGCTACATTACTGCTTCCGTTAGCACCAGATGAAGGCGATACCATCGTAGTTCGTGATATTGGCGGGCGTCCTGGCTATAACGGAATCTTAATTAAAGCACAAGATACTGGTGCGTCTATCGTATTTGGTGAATCGCGCCTGCGTGAGGTAAGACTTACACGTCCGTATTCACAAATTATGCTTACGTTTAGTAATGGTGCATGGCGTGCAAGTTTAACCGATTTTGGCGATACTGCTAAAATGGTAGTTCCGAACGGGATTGTTCCAACACAGGTACAGTCAGGTGATAACGTAGTTCGTCGTTATACTTCCAACTCAGAGATTTTTATTACTCTGCCGTTGTTCGCTAATTCAAACGATATCATCAATTTTACTGACCTTGATGGTACATCGCCGATTAACCATATGACTGTGCGTACGTTTGACCCAACTATCTCAATTGGGACTCCTGGACAAACAGAGGTTCAAGTACGTACTTCAGGCACCGGATTTTTGGTATATGACTCGATTGACAAAATCTGGCGTATTTTTGAAAATGATTTACGCACCCGAGTAAGAATAATTACTTCTGATGTTACTTTAATGCCTAATGAGCATATTTCTGTATTTGGCGCAGATAACAATACCGTTAAAACAATTAACGTTACTTTGCCTACAGACGTAGCTGTTGGGGATACTGTCACAATCGCAATGAATTATATGCGCAAAGGACAGACTGTAGTAATTAAAGCTTCTGATGGTGATACCATTGCAAGTAATTTGAATTTACTACAATTTCCAAAACGTTCAGAGTATCCACCTGATGCAGCATGGGTGCAATCAAGCTCAATTACCTTTAACGGAACTACATCGTATGTTCCTGTTCTTGGGCTTGCATATATTGAAGATAAAGCATCCGGAAAAAGCTATTGGATTGTAACTGAATCTGACCCTACCGTAGAACGAGTTGATGCTAAAGACAATACAACCAGAGCCCGATTAGGTGTTATTGCTCTTGCTACGCAGGCTCAAGCTAATGCGGAGTCAAATCCAGAAAAAGAATTAGCAATTACGCCAGAAACCTTAAATGGACGTCGTTCTACTGAAACCCAAACTGGTATAGCAAGAATTGCAACTTCCAGCGAAGTTAATCAGTCAACAACTGCTTCTTACTTGGATAATGTAATCGTTACTCCTAAAAAGCTTAACGAAAGGTCTGCTACTGAAACTCGTAGAGGTTTAGCAGAGATTGCGACTAATGCTAAAATGGATGCAGGAACAGACGATTTTACAATTGTTACTCCTAAGAAGTTGCTTTATCGTACTACATCAGATTCACGATTAGGTGTTATTCAATTAGTAAAAACTGGTGGTGCTCCTAACACAACTGCTGATCGTTCTTCTGCTGGCACCGGTATATTCGATCATTCTGATTACAAAAATGCAGTTACTCCAAAAACTCTTCGCGAGTATAAAGCTACTGTAAATCAGTCAGGAATAGTTTGGTTAGCAACTGATAGCGAAGTTAGAAACGGAACTCCGGCTTCTTCAAATATTCCTACAGTCGTTACACCAGAAGCTTTGCATAAAAAAGTTGCTACTGACGGAGCAATTGGATTAATCCAAATAGCTACACAAACTGAAGTTAATGCTGGCGGCGTGACTAATAAAGCAGTTACACCTAAAACATTAAATGACCGTACAGCAACTAACGATCGTACTGGTATTGCTCGCTTCGCGACACCTGGTGCCCAGGGTGAATTTGAAGCTGGTACTTCAAGTACAGTAATGGTAAACCCTAAATTACTGTTCGATAAATTTGCTAATACCGATCGTATCCAAGTTAATACTAGTTCTGGCTTAACTATTACTGGGAACCTCTGGGACCATTATACCATCAACATACAGGAAGCAAGTACTTCTCAAAGAGGTACAACCACTCTTGCTACTGCTGCTGAGGTTAGAACCGGCACCGACGCCAAGAAAATAGTTACTGCTGCCACGCTACATGCTAAAACAGCAACTGAAGGAGCTATCGGTCTTGCTCAGTATGCTACACAGGCACAAGTTGATGCAGGCACATTAAGTGATAGAATTGTTCCTCCTGCTTACTTGAAACAGACTATTCAGGTAACAGAGTCATGGCAAGCTACAGACAGCGTTAGAGGGACCGTGAGGCTATCTACAGGCGATGGAACTTGGAAAGGTAATGATACCAATGGCTCAACTCTTCCGGATAACGGGTATGCCTCTAAGGGCGTCGCAGTGTCTCCGTATGAATTGAACCTTACACTGAAACATTACTTGCCTCGTCTCGGTAAAGCCTATGACACAGGAATGTTAGGTGGTCAAACCCCAGACAAATATGCTCGTCGCGATATAGCGCAGACTATTTCTGGAGCTTGGACATTTAGTCAGGATACTTCATTTAGCAATAATATTTCTGTTCAGAATATTATATATGCTAATGGTGGCGAAGTTAAAATTTCTCCAACAGCTGATACTGGAAATGTGCATGTTCGTTTTCAAAATAGAGACGGAAGCGAGCGTGGTATAATTTATGCTGAGCCTCAAACAGCTTCAGCCGGAACTTTAAAAGTTCGCGTAAAAAACGGAACAGGAACTACTGCTGCAAGCCAGACCTACACATTTGGCGGTAACGGTACGTTAGAAGTTCCTAACGAAGTGTCAACTAAAACTCTGAGGTCTTCTGGAAATGCAATAGTTGGCGGAACTGTTATGGTTAAGGACGTTCAGATGCTTGCTGTCGAGGGATTGAATTCAATATTCGGTGCCCAATCACAGTCCGCATTTATTCGTTCCCGTGACGCTGATACACAAATTTTTGCACAGGATTCAACTGGATCGTATCCAATTTTAACTACCAAAAACTACGCAAGATTAGCTGATGGCCGTTATGTCAAGAAAGCTGGTGATACAATGACCGGCAATCTTAACATAAGCGGTTCTGCTATCGTTATCACAGGTTCTGAATCGTGGTATGTACCAACAAATGAAACTGTAATAAGACAAGGTTCTTGGACTGCTGAAATCAAAGACGCTACTAAATTGAAAGGTCTTCGCGGTTATATGGTTCCAATCAGAACACCGATTGACCCTGCTAATCCAAGCACATTAGTAGTAACTGGGTATGAAGAAAAAACTGCAGCTGGTGGTGTTTTAACTCAGGTTGGTGTAACTACAAACAATACTTATCAGCTTTGGACGCCTTATCCTCCAACAACCGAAACTGCTGATAAGCGTTTTGCGCATACTGTGTGGATGAGGATTTATAATCCAAACCTTAATAAGTTTGATGATTGGATGCGAGTATTTACATCTGCTACTCCTCCAACTGCAGCTGATATCGGAGCTCCGAGCTCAGTATCAACTCAGGTTAAAACCCTTGAAGTCCTGGAATGGATTAAGCTTGGCCCAGTTAAAATCTGGCCAGACCGTCCAAACCAAACTCTCAAATTTGAATGGGTAGGTGATTAA

Genome Context

Tertiary structure

QYC52947.1
ColabFold structure
Source ColabFold
pLDDT 27.8
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Complete genome sequence of a novel virulent Klebsiella virus vB_KpnP_TU02 infecting Klebsiella pneumoniae clinical isolate Nepal,R. and Malla,R. 2021-08-16 — GenBank