Protein

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Genbank accession
AUR84190.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTITRDKLKIFKPELLGTSDEAGGQRTRNVVQSGKLNELFRAISDIDHAQSSLDIVKCYPGVDTQDTSTLLDGHVFISEPPTDELVSMLLVESSSLDDDSRMVEMKEILESGVTAGDLITEGAPGFLPNQNTFSRDYLGSTHTGNYRVTNLRVGQVICITVEYDGTLDAKWPRIQHYCVVTDTNAPGTDAGNVVFDPPIDVATPDAGTSINGQGNCTKLRLVNETSPMKFHGVSKLTASANGKVLAVNNTTQNLIPIIIAESIHSGIKLAPTGIVKKSVTTPSSAAQTYQFQVSDTLQGTNQNVDYYPEVSFISGGVVYGSEDAVILVGSTSVDVTLSRKPDLNTIVTLSYISSAAYQNYSNDDPFPADRKLVPGSIFGVVLYNGTSYIMTEYSGSVYIKVDGTIPGGSWENELRAGIVDYDNGTIALEADFSTDTWVGLVEDTTILITTVNFLLSVSEPILDTFYVQVSNVSNVTLSGSSDSSGVITGSGVSGTIVNNFVSLTFNSSVKLDTLSYDVTELVHKLPPTEIYDLNPIRIANGGVVDIYKVWGTVSVQHTQYQAVDNPVDGKTMTIRTGARFVDITDKDGTSLWTPTDDNYIVDAAAGTVTIKSTFAGFNAPFVLGDSIGELALVTDFDETSVSLASDLTREYPLGSTVSSVQILGDMQARVGKVRDMTSWDGNWDVDGTPADSNMNTVDYPIEVTNETATNEDWVLVFTSATAFTCTGKRLGQIGSGDTLNDFAPINSITNSPFFVIRNEAFGAGWSAGEAIRFETFASADPIMAIRTVQAGHSQITTDRTVLAFRGNES
Physico‐chemical
properties
protein length:809 AA
molecular weight: 86839,63950 Da
isoelectric point:4,36941
aromaticity:0,07911
hydropathy:-0,07676

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR84190.1
1 809
Domain Start End Length (AA) Confidence
N-terminal 1 102 102 0,9660
Central domain 103 647 546 0,1394
C-terminal 648 809 161 0,6812
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-102
Central
103-647
C-terminal
648-809

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.050.O._10N.286.48.A6
[NCBI] 		2070716 No lineage information
Host Shewanella
[NCBI] 		22 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR84190.1 [NCBI]
Genbank nucleotide accession
MG592432.1 [NCBI]
CDS location
range 16579 -> 19008
strand +
CDS
ATGACAATCACTAGAGATAAACTAAAAATATTTAAGCCAGAATTACTAGGCACCAGTGATGAGGCGGGTGGTCAGCGTACCCGCAATGTCGTTCAATCAGGTAAATTGAATGAGCTATTTAGGGCAATTTCTGATATTGACCACGCACAATCATCACTAGACATTGTTAAGTGTTACCCCGGTGTGGATACTCAAGACACATCTACATTGCTTGATGGTCACGTGTTTATCAGTGAGCCGCCAACCGATGAGTTGGTTTCTATGCTGTTGGTTGAATCATCATCACTTGACGATGATTCACGTATGGTTGAAATGAAAGAAATACTTGAGTCAGGTGTGACAGCTGGTGATTTAATAACTGAGGGCGCTCCGGGTTTCCTACCTAATCAAAATACCTTTAGCCGCGACTACCTTGGATCAACTCACACAGGTAATTATAGAGTAACTAATTTACGTGTAGGTCAGGTTATATGTATCACGGTTGAGTATGACGGAACTTTAGACGCAAAGTGGCCTCGTATTCAACATTACTGTGTGGTAACTGATACTAATGCACCGGGCACCGATGCTGGTAATGTAGTATTCGACCCACCAATTGACGTGGCTACACCAGACGCAGGAACCAGTATTAATGGCCAAGGTAATTGTACTAAGTTGAGATTGGTTAACGAAACTAGCCCTATGAAATTTCACGGTGTGAGTAAACTAACAGCCAGTGCTAATGGTAAGGTATTAGCTGTCAACAATACCACTCAAAACTTAATACCTATTATCATAGCTGAGAGCATTCACAGTGGGATTAAACTTGCACCTACTGGTATAGTTAAAAAGTCTGTAACCACCCCATCTAGTGCAGCACAAACCTACCAATTCCAAGTGTCTGATACCCTACAGGGTACTAACCAGAATGTTGATTACTACCCTGAGGTTAGTTTTATATCGGGTGGTGTTGTTTACGGGTCAGAGGACGCCGTTATATTAGTTGGTTCCACAAGTGTTGATGTTACCCTCAGTAGAAAACCTGACTTAAACACTATTGTAACTCTGAGTTATATATCATCAGCAGCTTACCAGAACTACAGTAATGATGACCCATTCCCTGCTGACCGAAAGTTAGTACCCGGTTCAATCTTTGGTGTAGTCCTATACAACGGTACTAGCTATATCATGACTGAGTATAGCGGTTCAGTATACATTAAGGTTGATGGTACTATACCCGGTGGTTCTTGGGAGAATGAGTTGAGGGCTGGTATTGTTGATTACGACAATGGTACGATAGCATTAGAGGCTGATTTCTCAACTGATACTTGGGTTGGTTTAGTTGAGGACACCACAATATTAATCACTACAGTTAATTTTCTACTTTCTGTCAGTGAACCGATTTTAGATACATTCTACGTACAAGTATCAAACGTATCAAACGTAACCTTGAGCGGTAGTTCTGATTCAAGTGGCGTTATTACTGGGTCGGGTGTTTCTGGTACTATTGTTAATAACTTTGTATCACTAACATTTAATAGCTCGGTGAAGTTGGACACTTTAAGCTATGACGTGACTGAGTTAGTTCATAAACTACCACCCACTGAAATATATGATTTAAACCCAATACGGATAGCTAACGGTGGTGTAGTTGATATTTACAAAGTGTGGGGTACGGTATCAGTACAGCATACCCAATATCAAGCTGTAGATAATCCCGTTGACGGTAAGACTATGACCATTCGCACTGGTGCCAGATTTGTTGACATTACAGATAAGGACGGGACAAGTCTTTGGACACCCACTGATGATAATTACATAGTTGACGCAGCAGCTGGTACGGTAACCATTAAAAGTACATTCGCCGGGTTTAACGCACCGTTTGTATTAGGTGATTCAATAGGTGAATTAGCCTTGGTTACGGATTTCGATGAAACATCAGTCTCCCTTGCCTCAGACCTAACACGTGAGTACCCTTTAGGTTCTACGGTATCTAGTGTTCAAATATTAGGTGATATGCAAGCACGTGTTGGTAAAGTTCGTGATATGACAAGTTGGGATGGTAACTGGGACGTTGACGGTACGCCAGCTGATAGTAATATGAACACGGTAGACTATCCGATTGAAGTAACCAACGAGACTGCTACTAACGAAGATTGGGTATTAGTGTTCACCTCTGCAACAGCATTCACATGTACTGGTAAGCGTCTTGGTCAGATAGGCAGTGGTGACACGTTAAACGATTTTGCACCTATTAACTCAATAACAAACTCGCCATTTTTCGTAATACGTAACGAGGCGTTTGGTGCAGGGTGGTCAGCTGGTGAGGCAATTAGATTTGAAACATTCGCGTCAGCAGACCCAATAATGGCAATTAGAACAGTACAAGCGGGTCATAGCCAAATCACTACTGATAGAACAGTATTAGCTTTCCGTGGTAACGAATCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
643fde984634e9fbed5dcf835c32631e12d180902756c2d16bc79d4509e49172
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5913
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank