Protein

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Genbank accession
AKJ71629.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAEVCVTRHTGITDGQLSLEPWSAPRIVYEALYPSGADGDVTQTTTLPGKLMIDTGIVSWTNGSPLDAMIRVWIDRGSRQWTTSNPNVIQIRDRLTYAIGGQNPAVPDTTSVYTGQSGGGLDCGANAAATPYVGIYSEMEDPQVHEEWLGPIPPGDVLRVWYRCYLWTPPPWSSNANAGSPLHTAYVNSMFLRLMAFPTQDESVAG
Physico‐chemical
properties
protein length:206 AA
molecular weight: 22389,85260 Da
isoelectric point:4,59091
aromaticity:0,09223
hydropathy:-0,22573

Domains

Domains [InterPro]
IPR055596
STR
2–202
IPR055596
AKJ71629.1
1 206
Architecture
STR
STR 2-202 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Skermania phage SPI1
[NCBI] 		1636544 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AKJ71629.1 [NCBI]
Genbank nucleotide accession
KR011061.1 [NCBI]
CDS location
range 30071 -> 30691
strand +
CDS
ATGGCCGAGGTATGCGTAACCCGACATACGGGGATCACCGACGGCCAGCTATCCCTGGAGCCGTGGTCGGCGCCGCGCATCGTCTACGAAGCGCTCTACCCCTCGGGTGCGGACGGCGACGTCACCCAGACGACCACGCTTCCCGGCAAGCTCATGATCGACACGGGCATAGTCAGCTGGACCAACGGGTCCCCGCTCGACGCGATGATCCGGGTATGGATCGATCGCGGGTCGCGTCAGTGGACCACGTCCAACCCGAACGTCATTCAGATCCGCGATCGTCTCACGTACGCCATCGGTGGTCAGAACCCAGCTGTGCCGGATACGACCTCGGTGTATACCGGTCAGTCCGGGGGAGGTCTGGACTGTGGCGCCAACGCGGCGGCGACGCCGTACGTCGGTATCTACAGCGAGATGGAGGACCCGCAGGTACACGAGGAATGGCTAGGCCCCATCCCTCCCGGAGACGTCCTCCGAGTGTGGTACCGCTGCTATCTGTGGACTCCCCCACCCTGGAGTAGCAACGCCAACGCTGGGTCCCCCCTCCATACCGCGTACGTCAATTCGATGTTTCTGCGCCTCATGGCTTTTCCCACACAAGACGAGTCGGTCGCCGGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
a964f33e1f11779f1347d74ca45845da216f5696712c7afd1cf70cb9c1a32838
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6002
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of bacteriophage SPI1, which infects the activated-sludge-foaming bacterium Skermania piniformis Dyson,Z.A., Tucci,J., Seviour,R.J. and Petrovski,S. 2015 26459285 GenBank