Protein

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Genbank accession
YP_007006443.1 [GenBank]
Protein name
tail fiber protein/ lysozyme
RBP type
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence Phold
Probability 1,00
Protein sequence
MATTITNFLVGLGMDTTEFDKGQRNVTSGLDSMRSKALQLGALAGGAFGAKALTFGFAEAADNIGKFSEVFSVIPDDIRAMGAALAQEGGSLESFMAQIETLERLRASTPQQIGALFAEAGIRGVDPSVILSAKSATDAYLALADVFDDLTAKQRLAVAPVFGLDEASIRLLSKGRQEVESIVERQRDIRPLTAQMTEEAGRFNRQWKDIQNNIGSIADQISVGILPPLTDLVGELDDWVDANKELINSGINDFTAVFADNIHEIAIAGGLLATGGLLTGLAGMAKYVPLIGGGLAAAAMAARTITGIGAAGMAAYVGADIVDEKLRENISGYDEWDAKVTRYIYDITGVDLSRGNVNEGTERSTGSTERYSSDEMDAMARDMMTRLPTIEPTLFSSGMVAPQTQRNSQPAPQNNRPIQINMILDGQVLDSRIIDVTSRMDETTIDELSSSTAR
Physico‐chemical
properties
protein length:454 AA
molecular weight: 48400,02340 Da
isoelectric point:4,49860
aromaticity:0,05507
hydropathy:-0,06520

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VchM-138
[NCBI] 		1127518 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cholerae
[NCBI] 		666 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007006443.1 [NCBI]
Genbank nucleotide accession
NC_019518.1 [NCBI]
CDS location
range 34734 -> 36098
strand +
CDS
ATGGCTACGACGATCACTAATTTCCTAGTCGGTCTAGGAATGGACACAACGGAGTTCGATAAAGGTCAACGTAACGTAACGTCGGGCCTTGATTCAATGCGCTCCAAAGCGTTGCAACTCGGCGCTTTAGCGGGTGGTGCGTTCGGCGCTAAAGCGTTAACTTTCGGATTCGCCGAAGCTGCCGACAATATCGGTAAATTTTCCGAAGTGTTTAGCGTTATCCCTGACGATATCCGCGCCATGGGTGCAGCGCTAGCGCAAGAGGGTGGATCGCTTGAATCGTTCATGGCGCAAATTGAAACCTTAGAACGACTACGAGCATCTACACCACAGCAGATCGGGGCGCTTTTTGCCGAAGCGGGAATACGTGGTGTAGACCCTTCCGTCATCCTATCCGCTAAATCAGCGACCGACGCGTATTTAGCGTTAGCCGATGTATTCGACGATTTGACCGCTAAACAACGACTCGCCGTAGCGCCTGTTTTTGGATTAGATGAGGCGAGCATCAGACTGTTGTCAAAAGGTCGTCAAGAGGTTGAATCAATAGTCGAACGTCAGCGCGACATTCGACCTCTAACTGCTCAGATGACCGAAGAGGCGGGACGCTTTAACCGTCAATGGAAAGATATTCAAAATAATATTGGTAGTATTGCCGACCAAATCAGTGTGGGTATATTACCACCGTTAACCGATCTTGTGGGTGAGTTGGACGATTGGGTTGATGCTAACAAAGAATTAATAAACAGCGGTATTAACGACTTTACCGCGGTGTTTGCCGACAATATCCACGAGATTGCTATTGCGGGTGGGCTACTCGCTACGGGTGGGCTATTAACAGGTTTAGCAGGGATGGCTAAATACGTACCGCTTATCGGCGGTGGTTTAGCTGCAGCAGCGATGGCGGCACGTACCATTACGGGTATAGGTGCAGCGGGTATGGCTGCGTATGTGGGCGCGGATATCGTCGATGAAAAGTTACGTGAAAACATCAGCGGGTATGATGAATGGGACGCCAAAGTTACTAGATACATTTATGACATCACGGGGGTTGACTTATCTCGCGGTAATGTTAACGAGGGTACGGAACGTTCTACAGGTTCGACCGAGCGTTATTCTAGCGATGAAATGGATGCCATGGCGCGTGACATGATGACGAGATTACCGACGATTGAACCTACACTTTTTAGTTCGGGTATGGTAGCCCCTCAAACTCAACGTAACTCCCAACCTGCACCACAAAATAATCGACCCATACAGATAAACATGATCCTTGACGGTCAGGTGTTGGACTCACGTATAATCGATGTAACATCACGTATGGATGAGACAACTATTGATGAGTTGTCATCATCTACGGCACGGTAA

Tertiary structure

PDB ID
94951b43ea919092eac8dfde10dd5d990670b2dcd631f86fb697db5820afba13
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7223
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50