Protein

View in Explore
Genbank accession
YP_009224032.1 [GenBank]
Protein name
central tail fiber J
RBP type
TSP
Evidence RBPdetect
Probability 0,78
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MHIAPLRGAGGGGGGSSSKYKRTDDNLFSRDTVELVLGLSVGPIRGLTRGMKSFYVGGTPLMSEGGDMNFQSFNLGVKLGYESDGPVSYKLGGESSNKSVGTKMMSGTWISRQTEQTVRGVIDQLQVRINFQQLYRTDDKGDYNHTAQFYIQYKPASSGWWQNYGGEMVQITGKTTSGYYVDFVFDVPRINDDWLIRVMKVNPDSTNTNVCDMAWDSFQAITKSNRRYNKLALAHIVALATSQFGSIPDFAGVYDGRLIQIPTNYNPDTRLYDEITPWNGTFKTGWTNCPPWILYDLIMNPDYGLRKYYPQITVNRFDFYDAAKWCDTFVPNGKGGYQPRYTFNMALLEAKDGLEMLQWIAGSFGAVIFDDATGQVYLKVDKWEEPKMLFTPENVEGGDFNYSFTDMTTRYNDYKVQFVNPDLDWNQDQRRVYDPTHIASHGNIPTEMVMVGCTDEHEALRRGYYRMITALTETCSVTFNVARLGKVIDPYMVIAIADPTPGWSVSGRIKAYMNSYVQLRDPIYFTTVQNYTMTLQTVDGLVKVVVNPERVGTAFQVKVVSGFVPDGLPDRTVFSIEDNGNFGVAKPFRVMDIENIEGSADRFTIMAIEINRNKQAGADNCTPVGSVQYSFKNPLIPPPPMNIQADSGTEQMIIAQDGSIMARIFAYWDAPPNVLIERYEIEWKESDQSTWYYTTSPSESVFLAPCKSGVAYDIVVWAVNSFGNRSSALTLFNYVCIGKTAPPSNVKNFTIRRRTNDILLQWDAIPDLDRKGYEIRIGTTWETATVLVTDYSATQFAWTTTEGGSYSFLISAIDSSGNYSLLPTLQTIYIQGPSAVTGVIAIQSNNRIELRWTPNPEDNILEYEIREGGAWGTAVFLAKVKSTGYSVTAGSAGTRMFWIKAIASPGVYSERASFVTTDVAQLDDTNIIYTTDEVANGFLGSRYNMVVVGGELRMDSGRQRSEYIFPVTLPTRFRAQNTLFVGLDAIVDYSTTWAQATYPWDDPKARTPWVTPGDISSIGYKSEISLRREIPADVLHSWPLNGTLVSEGLSDRNPANILEQENITYGTGKYGRGLYVESGTPTPTKLRYTTIIPSTFSFSAWVRPMDVEDDVWFVMERGADWIAVVYNKEREAVMVTSTDSKQILIPFKINPGERYLVTLVQGSGDRTLYVGREDNTYAKGMVSAFPIGAITSVRYY
Physico‐chemical
properties
protein length:1196 AA
molecular weight: 133933,37620 Da
isoelectric point:5,13378
aromaticity:0,12124
hydropathy:-0,28445

Domains

Domains [InterPro]
IPR053171
11–821
IPR053171 IPR013783 IPR013320
IPR055385
96–223
IPR055385 IPR032876 IPR036116 IPR036116
IPR013783
634–732
IPR013783 IPR013783
IPR003961
637–723
IPR003961
IPR003961
639–743
IPR003961
YP_009224032.1
1 1196
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Achromobacter phage JWF
[NCBI] 		1589748 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009224032.1 [NCBI]
Genbank nucleotide accession
NC_029075 [NCBI]
CDS location
range 25378 -> 28968
strand +
CDS
ATGCACATTGCACCTTTGCGTGGAGCCGGTGGCGGCGGGGGCGGCAGCAGCTCCAAGTACAAGCGCACCGATGACAACCTCTTCTCCCGAGACACCGTTGAACTGGTCCTCGGGTTGAGCGTTGGTCCCATTCGTGGCCTGACCCGTGGCATGAAGAGCTTCTACGTTGGCGGCACCCCGCTGATGTCGGAAGGCGGCGACATGAACTTTCAATCTTTCAACCTGGGCGTCAAGCTCGGGTACGAGAGCGATGGTCCGGTCTCCTACAAGCTGGGTGGCGAATCCTCCAACAAGTCCGTTGGCACGAAGATGATGAGCGGTACGTGGATCAGTCGGCAGACCGAGCAGACCGTGCGCGGCGTGATCGACCAGCTCCAGGTTCGCATCAACTTCCAACAGCTGTACCGCACCGACGACAAGGGTGACTACAACCACACCGCGCAGTTCTACATCCAGTACAAGCCGGCGTCTTCCGGCTGGTGGCAGAACTATGGCGGCGAGATGGTCCAGATCACGGGCAAGACCACCTCTGGCTACTACGTGGACTTCGTCTTCGACGTGCCGCGCATCAATGATGACTGGCTCATCCGAGTCATGAAGGTGAACCCGGACAGCACGAACACCAACGTGTGCGACATGGCCTGGGACAGCTTTCAAGCTATCACCAAGAGCAATCGTCGCTACAACAAGCTGGCACTGGCCCACATCGTCGCGCTGGCCACCAGCCAGTTCGGCTCCATCCCCGACTTTGCTGGCGTCTACGATGGTCGCCTCATCCAGATCCCGACGAACTACAACCCTGACACCAGGCTCTACGACGAGATCACGCCGTGGAACGGCACGTTCAAAACGGGTTGGACGAACTGCCCGCCGTGGATCTTGTATGACCTGATCATGAATCCCGACTACGGCCTGCGGAAGTATTACCCGCAGATCACGGTCAACCGCTTCGACTTTTACGACGCGGCCAAGTGGTGCGATACCTTCGTGCCGAACGGCAAGGGTGGCTATCAGCCGCGCTACACGTTCAACATGGCGCTGCTGGAGGCCAAGGATGGTCTGGAGATGCTGCAATGGATCGCGGGCAGCTTCGGTGCTGTGATCTTCGATGATGCAACCGGCCAGGTCTATCTGAAAGTGGACAAGTGGGAAGAGCCGAAGATGCTCTTCACGCCGGAGAACGTTGAAGGTGGAGACTTCAACTACAGCTTCACCGACATGACCACGCGGTACAACGACTACAAGGTGCAGTTCGTCAACCCGGATCTCGACTGGAACCAGGATCAACGTCGCGTCTACGATCCCACCCACATCGCTTCGCATGGCAACATCCCGACCGAGATGGTCATGGTGGGATGCACCGACGAGCATGAAGCGCTGCGCCGTGGTTACTACCGCATGATCACGGCCTTGACCGAAACGTGCTCGGTCACGTTCAACGTTGCTCGCCTGGGCAAGGTGATCGACCCGTACATGGTCATCGCTATCGCTGACCCGACCCCTGGCTGGTCCGTCAGCGGCCGGATCAAGGCGTACATGAACAGCTACGTCCAGCTGCGAGATCCGATCTACTTCACGACGGTGCAGAACTACACCATGACCTTGCAGACCGTAGATGGCCTGGTCAAGGTGGTGGTAAATCCTGAGCGCGTGGGGACGGCTTTCCAGGTCAAGGTGGTGTCGGGCTTTGTGCCGGATGGTCTGCCGGATCGCACGGTGTTCTCTATCGAGGACAACGGCAACTTCGGCGTGGCCAAGCCCTTCCGGGTAATGGACATCGAGAACATCGAAGGCAGCGCTGATCGCTTCACGATCATGGCCATCGAGATCAACCGGAACAAGCAGGCCGGCGCGGACAACTGCACGCCGGTTGGCAGCGTCCAATACTCGTTCAAGAACCCGCTTATCCCTCCACCCCCGATGAACATTCAGGCGGACTCCGGCACCGAGCAAATGATCATCGCCCAGGATGGTTCCATCATGGCGCGGATCTTCGCGTATTGGGACGCCCCGCCCAACGTGCTAATCGAGCGCTATGAGATCGAGTGGAAAGAGAGCGATCAATCCACCTGGTATTACACGACCAGTCCCAGCGAAAGCGTGTTCCTTGCACCTTGCAAGAGCGGCGTGGCTTACGACATCGTGGTCTGGGCTGTGAACTCGTTCGGCAATCGCTCGTCGGCGCTGACGCTGTTCAACTATGTCTGCATCGGCAAGACCGCGCCCCCGTCGAACGTCAAGAACTTCACGATCCGCCGCCGCACGAATGACATCCTGCTGCAATGGGACGCTATCCCCGACCTCGACCGCAAGGGCTACGAGATCCGCATTGGCACGACGTGGGAGACCGCGACCGTGCTGGTGACGGACTACTCCGCTACGCAGTTCGCATGGACGACGACTGAAGGCGGAAGCTACTCGTTCTTGATCAGTGCCATCGACTCGTCGGGTAACTACTCGCTGCTGCCCACGCTGCAAACGATCTACATTCAAGGGCCGAGCGCGGTCACAGGTGTCATCGCCATCCAGTCGAACAACCGCATCGAGCTGCGCTGGACGCCGAACCCTGAAGACAACATCTTGGAATACGAGATCCGGGAGGGTGGCGCGTGGGGTACTGCGGTGTTCCTGGCCAAGGTCAAGTCCACCGGCTACAGCGTCACGGCCGGTTCCGCTGGCACGCGGATGTTCTGGATCAAGGCCATTGCCTCGCCTGGCGTCTACTCCGAACGTGCATCGTTCGTGACGACCGACGTAGCCCAGCTGGACGACACCAACATCATCTACACGACGGACGAAGTGGCCAATGGCTTCCTCGGTTCGCGCTACAACATGGTGGTGGTCGGCGGCGAGCTGCGAATGGACAGCGGCCGGCAGCGTTCCGAGTACATCTTCCCGGTCACGCTACCCACGCGCTTCCGGGCGCAGAACACGCTGTTCGTGGGTCTTGACGCCATCGTGGACTACAGCACGACTTGGGCGCAGGCCACCTACCCGTGGGACGACCCCAAGGCGCGCACGCCGTGGGTCACGCCCGGCGACATCTCATCCATCGGCTACAAGTCCGAGATCTCGCTGCGCCGCGAGATCCCTGCGGATGTGCTGCACTCCTGGCCCCTGAACGGCACGCTGGTCTCGGAAGGCTTGTCCGACCGCAACCCCGCCAACATCCTGGAACAGGAGAACATCACCTACGGCACCGGCAAATACGGCCGAGGCCTGTACGTGGAAAGCGGCACGCCGACGCCAACCAAGCTGCGCTACACGACCATCATCCCGTCCACCTTCAGCTTCAGCGCCTGGGTTCGCCCGATGGATGTTGAGGACGACGTGTGGTTCGTGATGGAACGCGGAGCTGACTGGATCGCCGTGGTCTACAACAAGGAACGCGAAGCCGTCATGGTCACTTCGACCGACAGCAAGCAGATCCTCATTCCTTTCAAGATCAACCCTGGTGAACGTTACCTGGTCACGCTCGTTCAAGGTAGCGGTGATCGCACCTTGTACGTCGGCCGTGAAGACAACACCTATGCCAAGGGCATGGTCTCCGCCTTCCCGATTGGCGCTATCACCAGCGTGAGGTACTACTGA

Tertiary structure

PDB ID
5f7d85adb09b461d50a42edb91cbf4145664b782709a4cd1679492d3448c3fa1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2146
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and genome comparisons of three Achromobacter phages of the Siphoviridae family Dreiseikelmann,B., Bunk,B., Rohde,M. and Wittmann,J. 2017-03-29 — GenBank