Protein

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Genbank accession
QIW88505.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSKSNTYENDLMLFTFNATAISGIGGNLFISLHSADVGEDGNQTTSEISYTGYSRVSIPRDNTGWTVVGNNAVNAAQILFGNCTGGTATATHWAIGTSSTGAGKVLYKGALNSSLAISLNIQPIIGANALSISED
Physico‐chemical
properties
protein length:135 AA
molecular weight: 13923,22570 Da
isoelectric point:4,85288
aromaticity:0,07407
hydropathy:0,04519

Domains

Domains [InterPro]
IPR056908
STR
3–132
IPR056908
QIW88505.1
1 135
Architecture
STR
STR 3-132 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIW88505.1
1 135
Domain Start End Length (AA) Confidence
N-terminal 1 132 132 0,2012
Central domain 133 132 1 0,0122
C-terminal 133 135 2 0,9529
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-132
Central
133-132
C-terminal
133-135

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudanabaena phage PA-SR01
[NCBI] 		2723892 No lineage information
Host Pseudanabaena sp.
[NCBI] 		1153 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIW88505.1 [NCBI]
Genbank nucleotide accession
MT234670 [NCBI]
CDS location
range 71730 -> 72137
strand +
CDS
ATGAGTAAATCAAATACTTACGAAAATGACCTAATGTTATTTACTTTCAATGCTACTGCAATTAGTGGCATTGGTGGTAATTTATTTATTTCTTTGCACAGTGCAGATGTGGGTGAAGATGGCAACCAGACTACTTCTGAAATTTCTTACACAGGGTATTCAAGAGTATCTATACCAAGAGATAACACAGGATGGACTGTTGTAGGTAATAATGCAGTAAACGCAGCCCAAATTTTATTTGGTAATTGTACTGGTGGAACAGCAACAGCAACTCATTGGGCTATTGGAACTTCCTCTACAGGAGCAGGAAAAGTGCTTTATAAAGGCGCACTAAATTCTTCTCTTGCCATCTCATTAAATATTCAACCAATTATCGGTGCTAACGCTTTAAGTATCTCAGAGGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
54ffb87a2d1e1eea629f1cbd176481f9e5c2b40b06ab234233201bafac126ab0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9245
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of first freshwater cyanophage infecting Pseudanabaena Zhang,D. 2020-08-17 — GenBank