Protein

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Genbank accession
WCF57101.1 [GenBank]
Protein name
polygalacturonase/tailspike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
TF
Evidence Phold
Probability 1,00
Protein sequence
MFFTQEDYRKIEKWFLANSRKDTDFAGAATPLKGNETVVLVQNGKNVKASVKDVVEQLFLLGVSDFVNITDKYGESYISLSQAIELIPYRSRKIGQVVTFLDDTGKWAMFQFQGTRKNQWGTLSLWVDLIDLMTGLTITDSEDIVTETNSANQVALKFADKTYNEADYSGLGRVYLRKNIVNVEDPVTGNIVTMNYLQQSMISKENTIYIIQYDYNLNGQTITIPSGCVLKFEGGSISNGSIKGTDTNIIAPQIRIFNTILLSGTWKVRDIFDDWFDFNATTNFDNINNFYNISILQSDDLENNVILKGNYYSSLKDGIVLSLSSNTNLVLNGSISLLPNNLSSYSIIKGVDKENIKISGGGRLIGDLQNHLGNTGEWGFGISFTGCKTISITNIDSSYMWGDGLYIGASDDTEEETLSQNIQVNNCKFEYNRRQGISITGAVDVFVNNCYFFNTGRINGTNPKAGLDIEPSGLYNSNVTISNCIADSNVSTGFLVYGDNRNIVIDNCASKNQLISITISQRSATTDNDDVFIRHGNIGGSLQITRGNIRVEDCEVDSVYFTADTSGIGANVTISNSVLGAKRWEGSTYFNSVFLIDSNSQINNLYIFDSKIDYDPSILTQGLFNIGGSSIRDNILFENCDISQKNTVNSLNTKVGSYRNCRFYNMTRIYLANEPNKTVEFTDNYCAMTKESPSTNIFSFLNSGNTQDVILFVVRNNTFSTKGSINVGSIGLIDVTGVNLGNKMIFENNHFLTQYPLTQEQIIKALSNRITVDTNYNFTSRFPYRATLESLPAYNAFDAGALIYGDDNLLYFWNGTNLTNSEGTDARKVVIV
Physico‐chemical
properties
protein length:832 AA
molecular weight: 92414,18210 Da
isoelectric point:4,76620
aromaticity:0,10577
hydropathy:-0,20817

Domains

Domains [InterPro]
IPR006626
302–323
IPR006626 IPR006626 IPR039448
IPR012334
305–538
IPR012334 IPR006626
IPR011050
306–520
IPR011050
IPR006626
419–441
IPR006626 IPR006626 IPR006626
WCF57101.1
1 832
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteroides phage PhiCrAssBcn13
[NCBI] 		3023095 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCF57101.1 [NCBI]
Genbank nucleotide accession
OQ221548 [NCBI]
CDS location
range 57318 -> 59816
strand -
CDS
ATGTTTTTTACACAAGAAGATTATAGAAAGATAGAGAAGTGGTTCTTAGCAAATAGTAGGAAAGATACTGACTTTGCTGGGGCAGCCACCCCTCTTAAAGGAAATGAAACTGTAGTTCTTGTACAGAATGGTAAGAATGTAAAGGCATCAGTGAAAGATGTAGTTGAGCAACTATTTCTTCTTGGTGTATCTGACTTTGTGAACATTACTGATAAGTATGGTGAGAGTTATATTTCACTATCTCAAGCTATAGAATTAATTCCTTATAGAAGTAGAAAGATTGGTCAGGTAGTTACTTTCTTGGATGATACTGGAAAATGGGCTATGTTCCAATTCCAAGGTACAAGGAAGAATCAGTGGGGTACTTTATCTCTTTGGGTTGATTTGATAGACCTTATGACAGGTCTTACTATCACAGATAGTGAAGATATTGTTACTGAGACTAATAGTGCAAATCAAGTAGCTCTTAAGTTTGCAGATAAAACTTATAATGAAGCTGACTACTCAGGTTTAGGCAGAGTATATCTTAGAAAGAATATTGTAAATGTTGAAGACCCTGTAACTGGTAATATAGTTACTATGAACTACTTACAGCAGTCAATGATTTCTAAAGAGAATACTATCTATATCATTCAGTATGACTACAATTTGAATGGTCAAACTATCACTATTCCAAGTGGGTGTGTACTCAAGTTTGAAGGAGGGAGTATAAGTAATGGTTCTATAAAGGGCACAGATACTAATATAATAGCTCCTCAAATTAGAATATTTAATACTATCTTATTATCTGGTACTTGGAAAGTTAGAGATATATTTGATGATTGGTTTGACTTTAATGCTACTACCAATTTTGATAATATCAATAATTTCTATAATATATCCATATTACAATCAGATGATTTGGAGAATAATGTAATTCTTAAAGGGAACTATTATAGTTCTCTTAAAGATGGAATAGTTTTGTCCTTATCTTCTAATACCAATTTAGTACTTAATGGTAGTATTAGCTTGCTTCCTAATAACCTATCTTCATATTCTATAATAAAAGGAGTTGATAAGGAAAATATTAAAATAAGTGGAGGAGGAAGACTAATTGGAGATTTACAAAATCACTTAGGTAATACTGGAGAATGGGGATTTGGTATTAGTTTCACAGGTTGTAAAACTATATCAATAACTAATATTGATAGTTCTTATATGTGGGGAGATGGCTTATATATTGGGGCATCAGATGATACAGAAGAGGAGACACTATCTCAAAACATACAAGTAAATAATTGTAAATTTGAATATAATAGAAGACAAGGTATATCTATTACAGGAGCTGTTGATGTATTTGTTAACAATTGTTATTTCTTTAATACTGGTAGAATAAATGGAACAAATCCAAAAGCTGGATTAGATATAGAACCAAGTGGATTATATAATAGTAATGTTACAATAAGTAATTGTATAGCAGATTCAAATGTATCTACTGGATTTTTGGTTTATGGGGATAATAGAAATATTGTAATTGATAATTGTGCATCTAAAAACCAATTAATATCTATAACTATATCCCAAAGAAGTGCAACAACTGACAATGATGATGTATTTATAAGGCATGGAAATATAGGAGGTTCTCTACAAATCACAAGAGGTAATATAAGGGTAGAGGACTGTGAAGTAGATTCAGTTTATTTTACTGCTGATACATCAGGGATAGGAGCAAATGTAACTATTAGTAATTCAGTGTTAGGAGCAAAAAGATGGGAAGGAAGTACATATTTCAATTCAGTTTTTTTGATTGATTCTAATAGCCAAATTAATAACTTGTATATATTTGATTCCAAAATAGATTATGACCCATCAATTCTTACTCAAGGGTTGTTCAATATAGGTGGGAGTTCTATAAGAGATAATATCCTATTTGAAAATTGTGATATTTCACAAAAAAATACAGTAAATTCTCTAAATACAAAAGTAGGCTCTTATAGAAATTGTAGATTCTATAATATGACAAGAATATACTTGGCTAATGAACCAAATAAAACAGTTGAGTTTACAGATAATTATTGTGCTATGACAAAAGAAAGTCCAAGTACTAACATATTTAGTTTTCTAAATTCAGGTAACACTCAAGATGTTATACTCTTTGTTGTAAGAAATAACACCTTTAGTACTAAGGGGTCTATAAATGTTGGAAGTATAGGACTTATAGATGTTACTGGAGTTAATCTTGGTAATAAAATGATATTTGAGAATAATCATTTCTTAACTCAATATCCTCTTACACAAGAGCAGATAATAAAAGCCCTAAGCAATAGGATAACAGTTGATACCAATTATAATTTTACCTCCAGATTTCCTTATAGAGCTACTTTAGAATCTTTACCTGCTTATAATGCTTTTGATGCAGGGGCTTTAATATATGGGGATGATAATTTGTTATACTTTTGGAATGGTACAAATTTAACTAATTCAGAAGGTACAGATGCCAGAAAGGTAGTAATAGTCTAA

Tertiary structure

PDB ID
5b08a2b150fa6acdbb63589b8c278c6ed692613599ae76bd5345932d254c8798
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7486
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50