Protein

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UniProt accession
A0A8S5VJM8 [UniProt]
Protein name
Collagen triple helix repeat protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MAFREILPADLSGKGNVGKPDTPGYSTAEMQRVMDEIPREVIVPIFNQLVTALNEMALENRTHNEGGCLYIRLNGDKVLETSNDGKTWQATGSSGHLILDDGGEEMPQRSRMQFMGATVTDNGGVTQIALRKGDTGAQGPQGPVGPQGPAGAQGNIGPMGPQGIQGPRGVQGLTGAQGPTGATGPTGPQGPKGEKGADGTSFVVLGRYNSLKMLEGAHPTGNKGDAYAVGSETDNVVHIWDVDANKWNPIGSLQGPQGPQGPQGPQGATGETGPVGPQGEVGPEGPQGIQGKKGETGERGPQGLQGLTGEQGPAGATGPQGEKGDPGVIQNVNGKTGESVWLNAEDVGAENAHSYKTVTVPASAWTSGDYTVSWDDGSTSSYNTCATVTVAGVTADSRIAVSDRTRVTDAVRIVAALEPGAGVVKFYANAAPTSAAVFVVEVSQ
Physico‐chemical
properties
protein length:444 AA
molecular weight: 45297,40330 Da
isoelectric point:4,78871
aromaticity:0,04505
hydropathy:-0,48086

Domains

Domains [InterPro]
IPR050149
131–337
IPR050149
IPR008160
136–194
IPR008160 IPR008160
G3DSA:1.20.5.320
172–211
G3DSA:1.20.5.320
A0A8S5VJM8
1 444
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Ackermannviridae sp
[NCBI] 		2831612 Uroviricota > Caudoviricetes > Ackermannviridae >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAG89070.1 [NCBI]
Genbank nucleotide accession
BK035253 [NCBI]
CDS location
range 22652 -> 23986
strand -
CDS
ATGGCATTCAGAGAAATATTACCCGCCGATTTGAGCGGCAAGGGCAACGTTGGCAAACCGGACACACCGGGTTACAGCACGGCAGAGATGCAGCGGGTCATGGACGAAATCCCGCGAGAAGTCATTGTGCCGATTTTCAACCAGCTTGTGACGGCCCTGAACGAAATGGCGCTGGAAAACCGCACCCACAATGAGGGCGGCTGCCTGTATATCCGGCTGAACGGCGATAAAGTCCTTGAGACGAGCAACGACGGCAAGACCTGGCAGGCTACCGGCAGCAGCGGCCATTTGATACTGGACGATGGCGGCGAGGAAATGCCGCAGCGAAGCCGGATGCAGTTTATGGGCGCGACCGTGACGGACAATGGCGGCGTGACACAGATAGCACTGCGCAAAGGTGATACCGGTGCACAAGGCCCGCAAGGCCCGGTAGGCCCGCAGGGGCCAGCTGGTGCACAGGGCAATATTGGCCCCATGGGGCCGCAGGGCATTCAAGGCCCGCGCGGCGTGCAGGGCTTGACCGGCGCACAAGGGCCGACCGGTGCAACAGGCCCGACAGGCCCGCAGGGGCCGAAGGGTGAGAAGGGCGCAGACGGCACGAGCTTTGTTGTGCTGGGACGCTACAACAGCCTGAAGATGTTGGAAGGAGCACACCCCACCGGCAACAAAGGCGACGCCTACGCGGTGGGCAGTGAGACCGACAACGTTGTGCACATTTGGGATGTAGATGCAAATAAATGGAATCCAATCGGCAGTTTGCAAGGCCCGCAGGGGCCGCAGGGGCCGCAGGGGCCGCAAGGCGCTACCGGTGAGACAGGCCCCGTTGGCCCGCAGGGTGAAGTTGGCCCGGAAGGGCCGCAGGGCATCCAGGGGAAAAAGGGAGAAACCGGTGAGAGAGGGCCGCAGGGCCTCCAGGGCTTGACAGGTGAGCAAGGCCCAGCCGGTGCGACAGGCCCGCAGGGTGAGAAAGGCGACCCGGGAGTTATCCAGAACGTGAACGGCAAGACCGGGGAATCGGTATGGCTGAATGCGGAGGATGTGGGCGCAGAAAACGCGCATAGCTACAAAACCGTTACGGTGCCTGCGTCAGCCTGGACTTCCGGCGATTATACAGTGTCTTGGGATGACGGCAGCACGAGCAGCTACAACACCTGCGCTACCGTCACGGTTGCCGGGGTTACGGCTGACAGTCGGATTGCCGTGAGTGACCGCACGAGAGTGACGGATGCAGTGCGTATTGTCGCCGCACTTGAACCCGGCGCAGGAGTGGTTAAGTTTTATGCGAACGCGGCGCCGACAAGTGCGGCTGTGTTTGTGGTGGAGGTGAGCCAATGA

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)
GO:0030020 extracellular matrix structural constituent conferring tensile strength Molecular Function IEA:TreeGrafter (UniProt)
GO:0030198 extracellular matrix organization Biological Process IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
3ccef835c49ad8c02983432ee314808b3eeaf7c059b32f52c5d2c4696c8ac056
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6456
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50