Protein

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Genbank accession
UYE97278.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MRYIGLDPNTRTVVQIDGNKSAYVNVKSFGASGLDRYFTGSVSGVSGSGRSLYINNISNYANYEEENFVVGREILAFFLTNNSAPDIGEYGSIFTNGSISAVGAVRDTSLSTAKQIEYFVFPYNVQTGKFSPYMLAEGSVTLSGMVITDPRTDFDEENYVQFTFSRTSSSWVPVIYRRYDNRVDFLGVIGNGALQTSNSVTFYDRGTTQIPSWDEAAINENANAFLPDFLTTQISLSGQNQGPVGKAIIGKKRLKIISKNEVTGVVEFEDADNPNTDLSSYSGSGITVKFKFDDTTPIQQTIEWAKVNQVKNIFFPSGTYNVSHVRLYDSAAAAAYSGISMFGTGLSSIIKKLPSTVNQVNQYGTIGILGTGVSNRVDGITIKDLAFDGNKRESIAVRSPENDVYGLSTKYQDFIAMEYADAVSIQNCSFYNGNGSALYALQSEKINLSNNRIYQLSKPYEPNIPPVKIRETDKLVAQGNLFENCTAPADFTGIDVSVVNNNIVNNCGDTGIQLTASDNWNAQGNLTYNSSGSVIQSTDLYQNEYSRASLAVKKGIVMEPTYFTVTDGQYPVEIAEESIVARVYELNSNYQFKTTGTQEFLQVVESEEQLKAGIFAVTAPMATVDPGQGGSNQGKRIKGTNNYKLLDVDNPTASERNYGYGYRITATARLGSFPIRKITGVPGSTSQIRIYLQNTADLLQIAFFADGNASNASVSTTNVRTSGSNPLSSWPDGDTFTVVSVDSQNSYFVIDTPTAVAADFTGQNEEYTTRVGDLSVVKTNYFIADGNIYVSD
Physico‐chemical
properties
protein length:792 AA
molecular weight: 86278,47610 Da
isoelectric point:4,76518
aromaticity:0,10732
hydropathy:-0,27677

Domains

Domains [InterPro]
IPR012334
STR
282–583
IPR012334
IPR011050
STR
289–545
IPR011050
IPR039448
ENZ
374–530
IPR039448
UYE97278.1
1 792
Architecture
STR
STR 282-583 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYE97278.1
1 792
Domain Start End Length (AA) Confidence
N-terminal 1 47 47 0,6147
Central domain 48 781 735 0,8086
C-terminal 782 792 10 0,1926
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-47
Central
48-781
C-terminal
782-792

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-TIM54
[NCBI] 		1137744 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 8102
[NCBI] 		84588 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYE97278.1 [NCBI]
Genbank nucleotide accession
OP053362.1 [NCBI]
CDS location
range 88784 -> 91162
strand +
CDS
ATGAGGTATATTGGCCTAGATCCTAATACAAGGACCGTTGTTCAAATCGACGGAAATAAGAGTGCTTACGTAAACGTTAAATCTTTTGGAGCATCGGGTCTAGACCGATATTTCACAGGCTCGGTTAGCGGGGTAAGCGGGAGTGGCAGATCGCTCTACATCAATAACATTAGCAATTACGCTAATTACGAAGAGGAAAATTTTGTAGTTGGAAGAGAGATACTTGCATTTTTCCTAACAAATAATTCAGCTCCTGATATAGGAGAGTATGGAAGCATTTTTACAAATGGTAGCATCAGCGCAGTTGGCGCTGTAAGAGACACAAGTCTTTCTACTGCAAAGCAAATTGAGTATTTTGTATTTCCATACAATGTACAAACTGGTAAATTCTCTCCTTATATGCTTGCTGAAGGATCAGTAACATTATCTGGGATGGTGATCACCGATCCTAGAACTGACTTTGATGAAGAGAACTACGTACAGTTTACTTTTAGCAGAACTTCATCCAGCTGGGTCCCTGTCATCTATAGAAGATACGATAACAGAGTTGATTTCTTAGGTGTTATTGGAAACGGAGCTCTTCAGACTTCGAATTCAGTTACATTCTATGATAGAGGAACTACTCAAATCCCTTCTTGGGATGAAGCGGCAATTAACGAGAACGCAAATGCCTTCCTACCAGATTTCTTAACTACACAGATCTCTCTTTCTGGACAGAACCAAGGGCCCGTAGGAAAAGCAATCATCGGCAAGAAGAGACTAAAAATAATCTCTAAAAATGAGGTAACAGGAGTTGTTGAGTTTGAAGATGCAGATAATCCTAACACTGATCTTTCCTCATACTCTGGATCTGGAATCACTGTTAAGTTTAAGTTTGACGATACCACCCCTATTCAACAAACTATCGAATGGGCAAAAGTAAATCAGGTTAAGAACATCTTCTTTCCATCTGGAACGTATAATGTCTCCCACGTTAGACTATACGACTCAGCGGCTGCAGCAGCTTACAGTGGTATCTCTATGTTTGGAACTGGATTATCTTCCATCATTAAAAAACTACCTTCTACTGTAAATCAAGTCAATCAATACGGAACTATTGGAATACTTGGCACTGGGGTTTCAAATAGAGTTGATGGAATTACTATTAAAGATCTTGCTTTTGACGGTAACAAGAGAGAGTCTATTGCGGTTAGATCTCCAGAGAACGATGTCTATGGATTATCCACAAAATATCAAGACTTCATTGCTATGGAATATGCAGACGCAGTTTCTATTCAGAATTGCTCGTTCTACAACGGAAATGGCTCTGCTCTATATGCTCTTCAGAGTGAAAAAATTAACCTTTCAAATAATAGAATCTATCAGCTGTCTAAGCCTTATGAGCCTAATATCCCTCCCGTTAAGATTAGAGAGACTGATAAGTTAGTTGCTCAGGGTAACTTATTTGAGAACTGCACAGCTCCAGCAGACTTTACAGGAATCGACGTATCGGTTGTCAATAACAACATTGTTAATAATTGTGGTGATACTGGTATTCAATTAACTGCTTCTGATAATTGGAACGCACAAGGTAACCTAACTTATAACTCTTCTGGTAGTGTGATTCAAAGCACGGATCTATATCAAAATGAGTACAGCAGAGCTTCTCTTGCTGTTAAGAAGGGAATTGTTATGGAGCCAACTTACTTCACAGTGACTGATGGACAATATCCTGTGGAGATTGCAGAGGAATCTATTGTTGCAAGAGTGTACGAGCTTAACTCTAATTATCAGTTTAAGACTACCGGAACACAAGAATTCTTGCAAGTTGTAGAATCTGAAGAACAGCTAAAAGCAGGAATCTTTGCGGTAACTGCCCCTATGGCTACAGTTGACCCAGGACAAGGAGGATCTAACCAGGGTAAGAGAATCAAAGGTACTAATAACTATAAATTACTTGATGTAGACAATCCTACAGCCTCTGAAAGGAACTACGGATACGGATATAGGATTACTGCAACAGCGAGACTAGGTAGTTTTCCTATTCGTAAAATAACAGGAGTCCCAGGTTCTACTTCTCAGATAAGAATCTATCTACAGAACACTGCCGATCTACTTCAAATTGCTTTCTTTGCCGATGGTAACGCCTCTAACGCATCCGTATCTACTACTAACGTAAGAACAAGCGGATCTAATCCTCTATCTAGTTGGCCCGACGGAGATACCTTCACCGTGGTGTCTGTAGATAGCCAAAATTCTTACTTTGTGATTGATACACCTACCGCGGTTGCTGCTGACTTTACAGGACAAAATGAAGAGTACACCACGAGAGTTGGAGACCTTAGCGTTGTAAAAACTAACTACTTCATTGCTGATGGGAACATCTACGTATCTGATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
7d981367ac18cacd6d6163c0346551920dbd18d41dda817ef5179867acef28cd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4430
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Widespread yet persistent low abundance of TIM5-like cyanophages in the oceans Baran,N., Carlson,M.C.G., Sabehi,G., Peleg,M., Kondratyeva,K., Pekarski,I. and Lindell,D. — — GenBank