Protein

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Genbank accession
AVR55350.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSTNTLNHISDESKYKTFNPAGTSFPSNIVNVQDALAALNPIAVNGIPGSTETVPGIIRIATQQEVNAGDSANTVVTPKTLKERLGNPQASTTKIGLTRYATTAEAVQGTIDNAAVVPTGLKGAIDNAFTVRTAKENVLGVIQLATIPMAEAGMDDTSAMTPLKTQRAIAKATAVIPVYGPATESALGVVRIATNGQVAQGTLRDGYAVSPSGLASLTSNESRAGIARAATAAEVNANTSGAIFVTPNTLNQRVGTTSTKGLVKLTTVAGQGDGNTALAFNADVLNLRGGQTVNGTTGFGNINVNGNINAGSGYIAGQQIATVNMLVDSVPVGTIIMWPGQYPPNGNWMHCDGTWLGRNDSRFTTLFSILGTLYGGDANNFALPDMRGMFPRGVGKSNIMNQYSGNDSKGKPGLGYGCGDAYLGQSAPQAVRRHKHNIGWGEHHNRGDAYFGCTVRNGYLGNNKRDSDNYLYFTNEGDEVEDASIRDGFGTMNTEGLIQWENRPWSIALNFVIKVR
Physico‐chemical
properties
protein length:516 AA
molecular weight: 54223,98290 Da
isoelectric point:7,69517
aromaticity:0,06589
hydropathy:-0,23837

Domains

Domains [InterPro]
SSF69349
246–341
SSF69349 IPR044916
G3DSA:2.10.280.10
246–283
G3DSA:2.10.280.10 IPR037053 IPR027448
IPR015173
246–312
IPR015173 SSF88874
IPR011083
333–391
IPR011083
AVR55350.1
1 516
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage myPSH1140
[NCBI] 		2108137 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVR55350.1 [NCBI]
Genbank nucleotide accession
MG999954.1 [NCBI]
CDS location
range 96019 -> 97569
strand +
CDS
ATGTCTACTAATACTCTAAATCACATCAGTGATGAATCAAAATATAAAACGTTTAACCCGGCGGGAACTAGTTTCCCGTCAAATATTGTAAACGTTCAAGACGCATTGGCTGCATTAAATCCAATTGCAGTTAATGGCATTCCAGGCTCAACTGAAACCGTTCCTGGCATAATTCGAATTGCTACCCAACAGGAAGTTAATGCTGGTGATTCAGCAAACACTGTAGTTACTCCGAAAACTTTAAAAGAACGTCTTGGTAATCCGCAAGCAAGTACAACTAAAATCGGTTTAACTCGTTACGCTACTACAGCTGAAGCTGTACAAGGAACTATTGATAATGCGGCTGTGGTTCCAACTGGATTAAAAGGCGCAATTGACAACGCATTTACTGTTCGTACTGCGAAAGAAAACGTTTTAGGTGTTATTCAATTAGCTACTATTCCAATGGCTGAAGCTGGAATGGACGATACTTCTGCAATGACTCCTCTTAAAACCCAGCGAGCTATTGCAAAAGCTACTGCTGTTATTCCGGTGTATGGTCCTGCAACTGAATCTGCATTAGGCGTTGTAAGAATTGCAACTAATGGTCAAGTAGCCCAAGGTACTCTTCGTGATGGATATGCTGTATCTCCAAGCGGATTAGCTTCATTAACTTCAAATGAATCTCGTGCTGGTATTGCTCGTGCAGCTACAGCAGCTGAAGTTAATGCTAACACCAGTGGAGCAATATTTGTAACTCCAAATACTCTTAATCAGCGTGTTGGCACAACTTCCACAAAGGGTCTTGTTAAATTAACTACTGTCGCTGGCCAAGGTGATGGAAACACAGCGCTTGCATTTAACGCTGATGTACTTAATCTCCGCGGTGGACAAACTGTTAATGGTACTACTGGCTTTGGCAATATCAACGTCAACGGTAATATCAACGCAGGTAGTGGATATATTGCTGGACAACAGATTGCTACTGTTAATATGTTAGTAGATTCTGTTCCAGTTGGAACAATCATTATGTGGCCAGGCCAATATCCACCAAACGGAAACTGGATGCATTGTGACGGTACTTGGCTTGGAAGAAATGACAGCCGTTTCACAACTTTATTCAGCATTCTTGGTACTTTATATGGCGGAGACGCAAATAACTTTGCTCTTCCAGATATGCGCGGAATGTTCCCTCGTGGTGTAGGTAAATCAAACATCATGAATCAGTATTCAGGAAATGACTCTAAAGGTAAACCTGGATTAGGATATGGCTGTGGTGATGCTTACTTAGGTCAATCGGCTCCTCAAGCAGTTCGTCGTCATAAACATAACATCGGTTGGGGCGAACACCATAACCGTGGTGATGCATATTTCGGTTGTACTGTAAGAAACGGTTATCTTGGAAATAACAAACGAGATTCAGATAACTATCTATACTTCACAAACGAAGGTGATGAAGTAGAAGATGCTTCTATCCGTGATGGCTTTGGTACAATGAACACTGAAGGTTTAATTCAGTGGGAAAACCGCCCTTGGTCAATTGCTCTAAACTTTGTAATAAAAGTAAGATAA

Tertiary structure

PDB ID
a538bb770e418102b253c0593fe8cf9a344275c92d8cc55a9eec2f5f499a0de1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7078
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, characterization and genome analysis of lytic bacteriophages against Enterobacter cloacae Ramesh,N., Prasanth,M., Tamhankar,A.J. and Lundborg,C.S. 2018-06-21 — GenBank