Protein

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UniProt accession
A0A1D7SD78 [UniProt]
Protein name
Structural protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 0,97
Protein sequence
MSFNINSDKEFIKASKPQIIGTAEFAIKSGVGVDEKEVIRALLDSEEKLPRVGINRTGQRVNNITVLTGGSGYTIRPTVTVSPPPAGVEGAIQALASSFIFNGRVSSIAINNPGKGYSEPPTVTITGGNGAGATAEAFLDTVDFELDINGAIRTSTSIISDTARILNLDIDNFVTPDANFRGPNLKNYMNNTGTIWSANVIVQKDSYRYFGSNVYQAINAGQTGDFAPEHLDGIVLNGEVQLKHIGFRVVDATEFGYNETGEAGIFPRSITPLLGDRSDKIATTEYVLNLATNDVGGRIYVSSQIGSDLNDGRSAVNPVRTVKRAAQLAWETVGVKETLIISGGDYVEDNPISLPPDASVVGDNLRLVIIRPNNPGKHIFKFGDKNYVTGVTYRDKVDANGDSVATWDFAMVFDDKQRILIDKEANGDFGVNFPTGHQVFGPSKFQINFQNNSGLAQLASGLEAVGVNTGARGDISNVRFDDLTGNNAYRNGKLDIVITSGSFLSGEGFRYLINGTQGVTLGSSSGTTRANALDNTILMSTDPTLSNIIPGGYVYLDGTSNALVGNGFYEVLQIDDDNAPDYYVTVAPILGSVGWREELAGTIDIYAASVNEGAFDSTSIDSIRSEGEVVYTTEDFDTPLPLSRIDFTLQGTFNDGFQNEVFGDAEDLGGIVFYTNALVGRENTHDFKEGEEILIEGLPTVSPDLSFLNGFQRIYKVIEDPDGRARRFVIPKKVDAALGLNSNNNFDPGQFATVKSATRSVTLSLLNSPNTFPIATPVDRRFQDAVTFIRNNRDFISDEVVGRINDEFKKEYYSVYNIAGTASSQFTPTDVSYNPATGDSVFTVANHGLVVGDGVRIDDDSVVFTCAMDGNATEHSAPQSHHYSSGKTLPITASTTNTFTVNVGASGPDQQYTPSNATYNPATGDMVLTIGSHGLSIGEGVVIDDNSISFTCQMDGFDTAKTYPRPGIDPFAGRSIPIKDVSDTTITLYVGVSGPNVTFTPSNATYDPATGDMVVTVGQHGLGVGRSIVLVDESLTFTCASDNNQSNHSYPRSTDPVSGKSIAITAVGTTQHTATDVDYDAVTGDTVITVPSHGFTTGDYIKIEDGSLVFTCDLDGDTVQKSYPRPSYDYPSNRWLSITVVDSEKFRVNIGASSYEGTHTFVSASSNGIDRQDGTFTFNVGASPVGQQYAHTFVSASLGAIKHEPQSIHSFQGATANAIKHLPQSAHTFVRAATGAIKVGGSTFDIFLGTTDDTHTYVSGGTVKYSGTTYSISNFTYDNIVTGVATVTVANPIANITDDATVLLADILLSCANGQKVYPSFSIPVDDDQCRQDVAHFLNALTRDLEFGCNHNMIEAAKKYIVGAKISYVENEIIQTIRAVEYTTQLAIFAMCNWRIGNRTPGEDVYTPVYSSIPRYFDDTVITTTATDGGTIACSNVESAIRTLSFLYVDVLANNTNGTNLDAAYLIARNRHLIADLALIDTETLYPSLNLSDTHQRKCRRDISYILGGLIRDLSLGGNSGIVTNAEFYYSGAALTGIDASQLEETRYAYTRVAEYAKSAMRNWSSSTTSEVVEVTPTTATYTPASGVVVIQIPTPSTIPDLNDRIAFKEGALTFTCSGGTHASPTPTDRNYGNSLTITNINNVGGGILEITVNVGNVTSLTGNVPHTFDSALADGTIIIYNPVDTSNSDIPKVEDWNILLYPTTPLCSNVATAIDTSFALLDGILEYADDDQSPTAIQPGATAIDTGTLYDTANIITYPDSFIYDADNQRVAVRGDYDDYPIIEASPYTQNASVISFLGGGGAEVDGNKVKQPNCPFPGLELDGTASFPNQGKSMVAAAFTIVSFGGTGYRVVNDGYTQLVSVFVIFCADGVLAESGGYCSITNSATNFGQFALRAIGFREEPYVFDAGYFSEGSYIRAIITNVSQTPTGRTILTIENLGREPLEHYILKVDGLRNVDEDTEFFVEEITQVGAGPPFTATCIFDDGSGSPVELVDIATGSTVTAANLSGRTVNLHRPSIVNSSSHTWEFAGSGTNYLALPENGGTKVEANEQVSEFYGRVYVSGTDELGDFKVGTFAKIENRTGAITFTGTVTISEVEFLKLKGGDVVVTGFDDSNTLGGASSSDSKIPTQKAVRDFITNNLGAYIQKEYSTNSVPRALVELTDSGKISLDQIPALRPFEVYTVSNLSERLEIEGALAGDIAIQQDNNTSFILNNDNDSLFLAFAVDPTLTFTINDIFEGSISQGQIQSTEYRQGVMYQIVITDPGSGYTIPPTLTISGGSPGLGAIGASASCTIANGQVVTVSIDEFNGYVGGFGYTAQPTITFSAPPAGGTQATGLALIESRLYGNIVNAIKITDTDQIDSSDLPAETVNLTRTINTSASDSNNWVSLSTSTVDARDITGGPIATDLLATNSTAANSYTFLRGDQSYALAVQSLKSPEERYFAKLTVPAQSGSINMVFATNQNALQGHLIVDSVFGIPSETIIQSVTTESGLTTIGFAQEKALTATIPAGTIIEFRRATSPIRFDSTFTEGNFIEEIIIADGGNGFTNGEYFNQGVVGGNGQGLKATYIVENNQVVDILITSGGSNYTQDFSTNIAPSVIGSGTGLDLRCKRSTINRQYANVTVDIDRVQEGSVDPEYGTVGVARFDKAQFFINVGGEGSIRLKTASNSVDSGLDADLLDGKQGSFYQNASSLTSGTLDSDRLAGTYNIDISGQSQNTIRLLSGINNPSSNPSPNTFSTGIISDTKNNNADQLVDGGTKHMVLTLRSGPDATYGGIRQLAFTDNDNMWLRGSGTGVTTFGTWAKIWTSENDGIDTGLDADRLDNKQGTWYQNALNINYGTISANRLPTFQSATSFRNTLKVKSYNGDPKYNIYVSGRILSTLPTPNPFTPGNAVKVYNANSQAIGDLEIDNLIINDDTADNFNDYTIIQARLISGGFTGALTIGTASNRVEFQDFTIADDNNIDIATLESDGGTANLRMGRTDGNASNPGIYFSSSQLAANYNSSIVATGGTGVDGSGTLNVQVVDSDGFTVKGNIIWNEGNVAFNDTNIVTTYNALGLPTLRSAVMRDASGDFAANQITVKAGFDGIVGASSLNVLKSGDTMTGTLDITGAGSGLSVQGITGLTGDVTMDNDLTIGTNVFFVDESEEEVGIGTLVPSDKLSVVGGSFSIASGSGSNSIGTTNGFGIVYDTTNGVAYQISKSTSGNTSITWGTSESGTTTNKMSLDPSGDLYPLLSTQDLGLNATNNRWRNAYIKDVYAKSSLAISDATANAGAPAYFLGASGFRNFRVGNQLLADNTFEITASTANGGQAWNSTPALFIQGSTNRVAINTTNFSGTDTSEATPVTRNYQLNIEGDLNFNGQLFQNNEEFVTSRWTLNKTTNNIWRLSKVGVGKPDPVYTIETAPLVVSGSLVNDGSVNVGGSTFNSGVNTSVVYANADPQYIDTYGIFKTNRNTISEGITIPSATNAMSAGPLTINNGVVVVIPNGSSWSVV
Physico‐chemical
properties
protein length:3496 AA
molecular weight: 371724,87230 Da
isoelectric point:4,46046
aromaticity:0,08610
hydropathy:-0,15355

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A1D7SD78
1 3496
Domain Start End Length (AA) Confidence
N-terminal 1 376 376 0,9764
Central domain 377 732 357 0,6279
C-terminal 733 3496 2763 0,1340
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-376
Central
377-732
C-terminal
733-3496

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-RIM44
[NCBI] 		1278485 Uroviricota > Caudoviricetes > Pantevenvirales > Vellamovirus > Vellamovirus rhodeisland44
Host Synechococcus
[NCBI] 		1129 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
c218c04cce369407ff29f9b7a8ee8eaff68ca498c1d47d1d82ab9304eb4d8c35
AlphaFold3
Source AlphaFold3
Method AlphaFold3
Resolution 0,8322
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50