Protein

View in Explore
Genbank accession
XXQ04738.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,92
Protein sequence
MIYAKDFHGTTDDERIQSAILAANQSKTSKTVQLEDKDYYIESKIHVMEDVELLFGYGSRFVAVKDTPLMEVQRNASVTNPYIAIDTADFDSPIFLLDGKHRYYNSWNRTAIKDGVIVNWSGSNKGTAFKFYAGGKDHEISFVNVSNIKIAGLKRGIDLEVEKPEEGMAWVNANRFSGITIEDCIEMIVMNGTETIPSECSGNIFTGLQLQPSSMTEKVLKVCGQHNRFDGMIWDVHMIPTENYVELTEQSAHTKLDISALPERAVRDLGKYTAMV
Physico‐chemical
properties
protein length:276 AA
molecular weight: 30979,73790 Da
isoelectric point:5,13526
aromaticity:0,09058
hydropathy:-0,29493

Domains

Domains [InterPro]
IPR012334
STR
6–250
IPR012334
IPR011050
STR
10–185
IPR011050 DC_0399
XXQ04738.1
1 276
Architecture
STR
RBD
STR 6-250 | RBD 251-276
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XXQ04738.1
1 276
Domain Start End Length (AA) Confidence
N-terminal 1 11 11 0,7785
Central domain 12 265 255 0,9959
C-terminal 266 276 10 0,1284
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-11
Central
12-265
C-terminal
266-276

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage Edson
[NCBI] 		3442624 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacillus cereus
[NCBI] 		1396 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XXQ04738.1 [NCBI]
Genbank nucleotide accession
PV796108.1 [NCBI]
CDS location
range 224878 -> 225708
strand +
CDS
ATGATATACGCTAAAGATTTTCATGGAACAACAGATGATGAAAGAATTCAATCTGCGATTCTTGCAGCGAATCAAAGTAAAACCTCTAAGACTGTACAACTAGAAGATAAAGATTATTACATTGAATCTAAAATTCATGTAATGGAAGATGTAGAATTATTGTTTGGATATGGTTCACGATTCGTTGCCGTAAAAGATACACCTCTTATGGAAGTGCAAAGGAACGCATCTGTTACCAATCCATACATTGCTATTGATACAGCAGACTTTGATTCACCTATCTTCTTATTAGATGGTAAGCATAGGTATTACAATAGCTGGAATCGAACAGCTATTAAAGATGGTGTCATCGTAAACTGGTCAGGTTCTAATAAAGGAACAGCTTTTAAGTTTTATGCTGGTGGTAAAGATCATGAGATTTCATTTGTAAATGTATCTAACATAAAGATTGCTGGTTTAAAACGAGGCATTGATTTAGAAGTTGAGAAACCAGAAGAAGGCATGGCATGGGTAAATGCTAATCGCTTTAGTGGAATCACAATTGAGGATTGCATTGAAATGATTGTGATGAATGGGACTGAAACCATTCCATCTGAATGTAGTGGTAATATCTTTACTGGATTACAACTACAACCTTCTAGCATGACAGAAAAAGTTTTAAAAGTATGTGGGCAACACAATCGTTTTGATGGTATGATTTGGGATGTACATATGATTCCTACAGAGAATTATGTAGAGCTTACAGAACAAAGCGCACATACCAAATTAGACATTAGTGCATTGCCAGAACGTGCTGTAAGAGATTTAGGGAAATATACTGCTATGGTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
4634f9c8a09e54a6d9a5ac220242a50fc7a01145659950cf43a562cd206c0bb0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9773
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a new Bacillus phage Lone,A., Kropinski,A.M. and Anany,H. 2020-07-22 — GenBank