Protein

View in Explore
Genbank accession
XCD29533.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,91
TF
Evidence Phold
Probability 1,00
Protein sequence
MALKTKIIVQQILNIDDTTTTASKYPKYTVVLGTSISSITASELTAAVEASAASAAAAKDSEIAAKESEINAKDSENLSANYANSSEASATQSATSATEAERQAGLSKDSADASAISASQSAASATKAAESSAAAKTSETNSLESSAAAKTSETNAKTSETNAKTSETNAAAYAAAAKTSETNAADSAASASDSKGFRDEAEAFAAQASTSALAAKNSETNTKTSEINSKASEDAAKLAQQGASDSANTATQAMTTIQGLKSDVEQLKADTQTIKEGAAIEIGAAKTEAVGAIDTAKVNAIAEITPLKQAAEDAATLAGQKAVTATEQATAAAGSATTAGEQAVAASSSATRAETAANKAEQTLSISLLKDQNLADLSDKVQARINLSVDRLKQSADSSRIYDPTNRYNLVVMDTGSWGVYDDTNNVFKPLGISAGGTGAWDAEGARNNIGALSKGGDTATAMIATRHSYPAGSSGQILGWSWRSIVEGYGIGTATADFYVNHTVGSVTYACIKPTRVTGESWEYLFSDFGEMSNIRSLIISHNTGAPGEASGNLSLSYGAGRITQYAARVDFYDGTARSVLNTYDDTRLTTLLPSAGVICRRGIGGNYQANSYSFSWENPGVDVWIDSTRIGRVTLDPTSDIDYKEQVEPWDGKSALNNINQLELVTFIFKDDIKRRVRRGIIAQQAATIDPEYTHSSEDKEGNTILSLDTNVLLLDALAAIQVLSARVSKLESLLEDKPTTLPEDPAPNQDLP
Physico‐chemical
properties
protein length:755 AA
molecular weight: 78572,12330 Da
isoelectric point:4,70902
aromaticity:0,05033
hydropathy:-0,33510

Domains

Domains [InterPro]
Coil
250–270
Coil IPR030392
IPR030392
641–737
IPR030392
XCD29533.1
1 755
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage PMBT27
[NCBI] 		3137285 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCD29533.1 [NCBI]
Genbank nucleotide accession
PP554578 [NCBI]
CDS location
range 51893 -> 54160
strand -
CDS
ATGGCACTTAAAACTAAAATTATTGTACAGCAGATTCTGAACATAGATGACACTACAACTACTGCTAGTAAATATCCTAAATACACAGTAGTTTTAGGTACTTCTATTAGTTCTATTACTGCTAGCGAACTAACAGCGGCTGTTGAGGCCTCTGCTGCTTCTGCTGCGGCAGCAAAAGATTCTGAAATTGCAGCAAAAGAATCTGAAATAAATGCTAAGGACTCTGAGAACCTATCTGCAAATTATGCTAACTCTTCAGAAGCTTCTGCAACTCAATCTGCTACTTCTGCTACTGAAGCGGAGAGACAAGCTGGTTTATCTAAAGATAGTGCCGATGCCTCTGCTATTTCTGCTTCTCAATCTGCTGCGTCCGCTACTAAAGCTGCAGAATCATCAGCTGCAGCAAAAACTAGTGAAACTAACTCTCTAGAATCATCAGCTGCAGCAAAAACTAGTGAGACTAATGCAAAAACTAGTGAGACTAATGCAAAAACTAGCGAGACTAATGCAGCAGCATATGCAGCAGCAGCAAAAACTAGCGAGACTAATGCTGCTGATTCCGCTGCCTCTGCTTCTGACTCCAAAGGATTCAGGGATGAAGCAGAAGCATTCGCTGCACAAGCCTCCACATCAGCATTAGCAGCAAAAAACTCAGAAACTAATACAAAGACTAGCGAAATTAACTCAAAAGCTAGTGAAGACGCTGCTAAGCTAGCTCAGCAAGGTGCATCAGATAGCGCGAACACAGCTACGCAAGCGATGACCACAATACAGGGTCTTAAGTCCGATGTTGAACAGCTTAAAGCTGACACTCAGACCATTAAAGAAGGTGCGGCAATAGAGATTGGAGCAGCTAAGACGGAGGCAGTAGGAGCAATTGACACAGCTAAGGTAAACGCAATTGCTGAAATCACCCCGTTAAAACAAGCTGCGGAAGACGCTGCCACCTTAGCTGGACAAAAGGCAGTAACAGCTACAGAACAAGCTACAGCCGCGGCTGGAAGCGCTACAACCGCAGGAGAACAAGCCGTAGCAGCATCCAGTTCCGCAACTCGAGCTGAGACCGCAGCAAACAAAGCTGAACAAACTTTGAGCATATCTTTGTTAAAGGATCAGAACCTTGCAGACTTAAGTGACAAGGTACAGGCTCGTATAAACCTAAGTGTAGATCGTCTTAAACAGAGCGCTGATAGTTCCCGCATTTATGACCCGACAAACCGCTACAACTTAGTTGTAATGGATACAGGGTCTTGGGGTGTGTATGACGACACGAACAACGTGTTCAAACCTTTAGGTATATCCGCTGGAGGTACAGGAGCTTGGGACGCAGAGGGTGCTCGCAACAACATTGGGGCGCTGTCCAAAGGTGGTGACACTGCAACCGCCATGATTGCTACTCGACATTCTTATCCTGCTGGCTCATCAGGTCAAATTTTGGGTTGGTCGTGGCGATCAATTGTAGAAGGCTATGGTATCGGAACGGCGACTGCTGATTTTTACGTAAACCACACAGTAGGAAGCGTCACATATGCCTGCATTAAGCCTACTCGAGTGACCGGTGAAAGCTGGGAGTATCTTTTTAGCGACTTTGGCGAAATGTCTAATATTAGAAGCCTGATTATTAGTCATAACACAGGAGCGCCAGGGGAAGCATCTGGAAATCTAAGTTTGAGTTACGGGGCCGGGCGCATTACACAGTATGCCGCTCGTGTAGATTTTTACGATGGAACTGCACGATCTGTTTTAAATACCTACGATGATACTCGCTTAACAACTCTCTTACCCTCGGCAGGTGTCATTTGCCGTAGAGGTATTGGTGGTAATTACCAAGCAAATAGCTATTCTTTCTCGTGGGAGAATCCGGGAGTCGATGTATGGATTGATAGTACTCGTATTGGGCGAGTAACTCTGGATCCTACAAGCGACATTGATTATAAAGAACAGGTTGAGCCATGGGACGGTAAGAGTGCGTTAAACAACATCAATCAGTTAGAGCTCGTGACGTTTATCTTTAAAGATGATATAAAGCGTCGGGTACGTCGTGGAATCATTGCACAGCAAGCGGCAACCATAGACCCTGAATACACACACTCAAGCGAGGACAAGGAGGGAAATACAATTCTTTCGCTTGATACTAACGTGCTGTTACTGGATGCGCTTGCTGCTATCCAGGTGCTAAGCGCCCGTGTCAGTAAGTTAGAGTCTTTGTTAGAAGATAAGCCAACCACTCTACCTGAAGACCCCGCTCCAAATCAAGACCTTCCTTAA

Tertiary structure

PDB ID
de9273b036fe56dab8ced2b72f8a30d7a438adefc91eb6926511021ba6c0e6b1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6321
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
This phage originates from the Bacteriophage catalogue of the Bacteriophage Competence Centre, Department of Microbiology und Biotechnology, Max Rubner-Institut, Kiel, Germany Sprotte,S. and Brinks,E. 2020-12-18 — GenBank