Protein

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Genbank accession
QYC51728.1 [GenBank]
Protein name
pectate lyase superfamily protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MTNPTLVTTPFAENGDKNIIPESVGAEPQNATMQTGFPPITQQKISEGGIPPERNDFNGMFNLVTQHLVHLNNGMSYEFDQEHANKIGGYPLNARVMLNNGDIVRSTVANNTVNPNSDMTGWVKVNSAKNIFDEVFGISQSIINGNLITVDNFGAKGDGVTDDSAAFQAYCDSALTGQNLYLGAKGRYIIKNQVDLKGKGLVGNGCGKVSETYYNLGCIDVDGSSATLANKSAFINCGPTIQNVTARCSNGAGKQVSFIEIDGYLANISYVTIVNFYNQIVVKEALVGFNINNAWLYYSQNAGIYCEDPNNRVSTTGTFHNMYFQLGDGYAMIFDRDIHGSDFDNIIFESMNGGIKARTVAHCGFGKFWCENLKTATSKDWLEVTGANSCYGNSFTGYVKLLGGWTSKTSPILDSLSTNNYGGVSVSADGISIVAAGNKAKMLMLPSGFKTGNAVIDETHINSTTVTPLTKRRVIGADASGAQYLASDTYTKLSRKWSTYNHGSNNAGAFYAPMMLTYDQSFSTPQNNNGWQIVKESVGVYRVERVSGNTSVITNGHIVVGSPLMGSRLGTGTGATHGVQMIETYPGSWTSFAEAAGFKVFWRDAANALVDPYRFTVAFTATS
Physico‐chemical
properties
protein length:623 AA
molecular weight: 67109,26470 Da
isoelectric point:5,95834
aromaticity:0,10273
hydropathy:-0,20353

Domains

Domains [InterPro]
IPR012334
102–329
IPR012334
IPR011050
145–378
IPR011050
IPR024535
149–357
IPR024535
QYC51728.1
1 623
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage Abp95
[NCBI] 		2863681 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QYC51728.1 [NCBI]
Genbank nucleotide accession
MZ618622 [NCBI]
CDS location
range 37436 -> 39307
strand +
CDS
ATGACAAACCCAACTTTAGTTACAACCCCATTCGCTGAAAATGGCGATAAAAATATCATCCCTGAATCAGTTGGCGCTGAACCGCAAAATGCAACTATGCAAACTGGATTCCCGCCAATCACTCAACAAAAGATTTCTGAGGGCGGTATTCCTCCTGAGCGAAATGACTTTAATGGAATGTTCAACCTAGTTACGCAACATTTAGTACATCTTAATAACGGCATGTCTTATGAGTTCGATCAAGAGCATGCAAATAAGATAGGTGGTTATCCATTAAATGCGCGTGTGATGCTTAATAATGGCGATATTGTTCGCTCTACTGTTGCAAATAACACAGTCAACCCCAATAGTGATATGACTGGTTGGGTGAAAGTTAATTCAGCAAAAAATATTTTTGATGAAGTATTTGGAATATCGCAATCAATAATCAATGGAAATCTAATTACTGTTGATAATTTCGGCGCAAAGGGCGATGGTGTTACTGATGATAGTGCAGCGTTTCAAGCATATTGTGATAGTGCTTTAACTGGACAAAATCTCTATCTTGGAGCAAAAGGTCGATACATAATCAAGAATCAAGTAGACCTTAAAGGTAAAGGCTTGGTTGGTAACGGGTGCGGAAAGGTTTCTGAAACTTATTACAATTTGGGATGTATTGATGTGGATGGTAGCTCCGCGACACTTGCAAACAAATCTGCATTTATAAATTGTGGCCCAACCATACAGAATGTTACAGCAAGATGTTCAAACGGAGCCGGAAAACAAGTTTCATTTATTGAAATCGACGGGTATTTAGCAAATATTTCTTATGTCACGATTGTAAACTTTTACAATCAAATCGTAGTAAAAGAGGCACTTGTTGGCTTTAACATCAATAACGCTTGGTTGTACTACTCTCAAAACGCTGGTATCTACTGCGAAGATCCTAATAACCGTGTAAGTACAACCGGAACATTCCATAACATGTATTTCCAATTAGGTGACGGTTATGCAATGATTTTTGATAGAGATATTCATGGTAGTGATTTCGATAATATTATTTTTGAAAGCATGAATGGTGGTATCAAAGCTAGAACTGTGGCGCATTGCGGGTTTGGTAAATTCTGGTGTGAGAACTTAAAGACAGCAACGTCAAAGGACTGGCTAGAAGTCACTGGTGCTAATAGCTGTTATGGAAATAGCTTTACTGGCTATGTTAAATTATTAGGCGGCTGGACATCAAAAACATCACCAATACTAGATTCTTTGTCAACAAATAACTACGGTGGCGTGTCGGTTAGTGCGGACGGTATATCAATCGTTGCAGCAGGCAACAAAGCTAAGATGCTAATGCTACCTAGCGGCTTTAAAACAGGTAATGCTGTCATTGACGAAACACATATTAACTCTACTACTGTAACACCATTAACTAAACGCCGTGTTATCGGCGCAGATGCTTCTGGCGCTCAGTATCTTGCATCGGATACGTACACTAAATTATCTCGTAAATGGAGTACGTATAATCATGGTTCTAACAACGCGGGTGCATTCTATGCACCAATGATGCTGACTTATGATCAGTCATTCAGCACACCTCAAAATAACAACGGTTGGCAGATCGTAAAAGAGTCAGTCGGGGTATATCGAGTTGAGCGAGTTTCTGGAAATACATCGGTAATCACAAATGGGCACATTGTTGTTGGCTCGCCATTAATGGGTTCTCGTTTGGGGACTGGAACAGGTGCCACGCATGGAGTTCAAATGATTGAGACATATCCTGGGTCATGGACTTCTTTCGCTGAAGCGGCGGGATTTAAAGTATTTTGGCGCGATGCGGCAAATGCCCTAGTAGATCCATACAGGTTTACAGTTGCATTTACAGCAACGAGTTAA

Tertiary structure

PDB ID
f3c1ce77f68621694ab5327682df01eda1c92f3bbda84cd954f32d0c0d2d62ca
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6801
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of wide host range lytic phage Abp95 against multi-genotype of Carbapenem-Resistant Acinetobacter baumannii Huang,L. 2021-11-11 — GenBank