Protein

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Genbank accession
YP_010298753.1 [GenBank]
Protein name
putative virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MNSVTESFLLDHARTNLWCAPIQDRQVILDLTRITKDSGVKVSHSILWVDTPLPTETDVYHLYQIGNNSRWRTGLPDKRGVWMALGPYAEVNDLVVDLYLETGIKLPLFSSYVLRTYDDNLIIAIKDYSTRWELAKEKVYLRIYNNAFFRSDRSNNIGKKIAYLGREIVRQSDIATFITALRPLQALTGVVNIFHNGVWKPEIKSTDIAIGDLIEAFYDSAVSHVVDFKISSLYDYTSTLDNLKKYLLHPSKNTHDNEIYYVDDIDLYLYKVDSASALSGRYYHRNKENSLRNVTHADYSIPTGYVSAYINDGWTSYENCYIRLHLRESGYNRPLIHEVNRIETLYRLSDTDILRAMIGIDSTLTEWRVENLENSLYTAIMRNFWASFTATDVINAYGYNALATLFALNPTKVTPSSNGGYVDVPFGLSLCSTLFEYDENGLLLGWHKHGYAERYFVKDEAAALVEGIIGWGTKAITWSPSNDNATLDDKYQYYFFTCPINNGVLTGEWVPAVEGTHYTVLNNVVTWIHVKARNMGLILTSKDALVYDQLVDSSDGIYRFTLTYSKTAGTVLPIRPRQLRVWMNGHPLIEGLDFILSGNQGTLITNRYYDESLGSMQKFTFAGLGWETPTVTHSPPKSIGFVDHGYVSVNGRFDVRDDKVIRTVIDGKLVDPSTVPFIEDADEKQIPLLPNGLAYSEEMVYVPLYGISSNANAELIEMGTESDKRVNDYMTLKFPEKELTGPNPINERYRMFSVVITRLLFDLENGTISEPLSVNDKVALDKIMAKYTAYLDIDPCRSTWNTNYIFIDAHPFSSAVGITTKRWQFLQNINLYYLNNRLALNDYFFIKES
Physico‐chemical
properties
protein length:849 AA
molecular weight: 96828,36250 Da
isoelectric point:5,43440
aromaticity:0,12250
hydropathy:-0,21955

Domains

Domains [InterPro]
IPR055617
STR
5–848
IPR055617
YP_010298753.1
1 849
Architecture
STR
STR 5-848 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010298753.1
1 849
Domain Start End Length (AA) Confidence
N-terminal 1 228 228 0,9052
Central domain 229 510 283 0,6040
C-terminal 511 849 338 0,0340
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-228
Central
229-510
C-terminal
511-849

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpM_FBKp24
[NCBI] 		2801834 Uroviricota > Caudoviricetes > Chimalliviridae > Maaswegvirus Kp24 >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010298753.1 [NCBI]
Genbank nucleotide accession
NC_061421 [NCBI]
CDS location
range 103143 -> 105692
strand -
CDS
ATGAATTCAGTTACTGAAAGTTTCCTTCTCGATCATGCACGTACAAATCTCTGGTGCGCGCCTATTCAAGATCGGCAAGTAATCCTGGACTTAACACGAATCACGAAAGACAGCGGGGTAAAGGTCTCTCATTCCATTCTTTGGGTTGACACCCCGTTACCCACAGAAACCGACGTCTACCATCTTTATCAGATCGGGAATAACAGCAGATGGCGTACAGGACTTCCCGATAAACGCGGGGTATGGATGGCGTTAGGGCCTTACGCTGAGGTCAACGATTTAGTTGTTGACCTCTATTTGGAAACGGGGATCAAACTCCCTTTGTTTTCGAGTTACGTTCTTCGGACCTACGACGACAATTTAATTATCGCGATCAAAGACTATTCTACACGCTGGGAACTGGCGAAAGAAAAAGTTTATCTTCGTATTTACAACAACGCTTTTTTCCGTTCGGATCGCAGTAACAATATCGGGAAAAAGATTGCTTATCTCGGACGAGAAATCGTCCGTCAAAGCGATATTGCGACGTTTATTACAGCACTGCGGCCGCTGCAGGCGTTAACGGGCGTTGTGAACATCTTTCACAATGGGGTTTGGAAACCTGAGATCAAATCCACGGACATTGCCATTGGGGATCTTATCGAGGCGTTCTACGACTCTGCGGTTAGTCATGTGGTTGATTTTAAAATCTCATCGTTATACGATTATACGTCAACACTGGATAATCTGAAGAAATATTTACTGCACCCGAGTAAAAATACCCACGACAACGAAATTTATTACGTTGACGACATCGATCTTTACCTTTACAAAGTCGACAGTGCCAGCGCATTGAGCGGACGTTATTACCACCGTAATAAAGAAAACAGCTTACGGAACGTCACACATGCCGATTACAGTATTCCCACCGGTTACGTCTCTGCTTACATCAATGACGGCTGGACGTCGTATGAAAACTGTTATATTCGTCTACACCTGAGGGAGTCCGGTTACAATCGTCCGTTGATTCACGAAGTCAACCGAATCGAAACCCTTTACCGCTTAAGTGATACCGACATTTTAAGGGCGATGATCGGGATTGATTCCACGCTGACAGAATGGCGTGTTGAAAATCTTGAAAATTCACTTTATACCGCCATCATGAGAAACTTCTGGGCGAGCTTCACAGCGACCGACGTAATCAATGCGTACGGTTACAATGCGTTGGCTACGCTGTTTGCATTAAACCCGACGAAAGTTACTCCCTCCTCTAACGGCGGTTACGTCGACGTTCCTTTTGGTCTGTCGCTTTGCTCAACGCTTTTTGAGTACGACGAGAACGGCCTTTTACTGGGGTGGCATAAACACGGTTATGCAGAGCGGTATTTCGTGAAAGATGAAGCGGCGGCGTTGGTGGAAGGGATTATTGGTTGGGGGACGAAAGCCATTACTTGGTCACCGAGCAATGATAACGCCACATTGGACGATAAGTATCAATACTACTTCTTCACCTGCCCTATTAACAATGGTGTCTTAACCGGTGAATGGGTGCCTGCTGTCGAAGGAACGCACTATACTGTCCTGAATAACGTTGTGACCTGGATTCACGTTAAAGCACGAAACATGGGATTAATTCTCACTAGTAAGGATGCGTTGGTTTACGATCAGTTAGTGGACAGCTCGGACGGTATTTATCGTTTCACCTTGACCTACAGTAAAACCGCAGGAACTGTACTACCTATTCGACCACGTCAATTACGTGTTTGGATGAACGGTCATCCGTTGATTGAAGGACTTGATTTTATTCTTTCTGGTAATCAGGGTACTTTGATCACTAATCGTTATTACGACGAATCGCTCGGCTCGATGCAAAAATTCACGTTTGCTGGTTTAGGTTGGGAAACGCCCACTGTCACCCATTCTCCTCCGAAAAGCATTGGATTTGTTGACCACGGTTATGTCAGTGTTAACGGGCGTTTTGATGTACGAGACGACAAAGTTATTCGGACTGTCATCGATGGGAAATTAGTAGACCCCAGTACGGTCCCGTTCATCGAAGATGCGGATGAAAAACAAATTCCGTTACTCCCTAATGGACTGGCTTATTCTGAAGAAATGGTTTATGTCCCGCTTTATGGTATTTCCAGTAATGCCAACGCGGAACTGATTGAAATGGGCACGGAGTCCGATAAGCGCGTTAATGATTACATGACGTTGAAATTCCCGGAGAAAGAATTAACGGGACCGAACCCGATCAATGAACGATACAGAATGTTCTCTGTTGTCATTACCCGTTTACTCTTTGATCTTGAAAACGGGACGATCAGTGAGCCTCTAAGTGTTAACGATAAGGTCGCTCTGGATAAGATCATGGCTAAGTACACTGCGTATTTAGACATCGACCCGTGCAGGAGTACCTGGAACACAAATTATATCTTCATCGATGCGCACCCGTTTTCATCCGCTGTCGGAATCACGACGAAACGTTGGCAGTTCTTACAGAACATCAATCTTTACTATCTCAATAATCGTCTTGCTCTTAACGATTATTTCTTTATAAAGGAATCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
51e4b9cfab62c1b176bfe8fdc14f2bb30b3260fdf1fae278092b1320f1cc5909
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2771
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization of four novel bacteriophages infecting Klebsiella pneumoniae Estrada Bonilla,B., Costa,A.R., van Rossum,T., Hagedoorn,S., Wallinga,H., Xiao,M., Song,W., Haas,P.-J., Nobrega,F.L. and Brouns,S.J.J. 2021-03-02 — GenBank