Protein

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Genbank accession
AUR95648.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MASIDIPNACSTSANEPVGTTSLEAASCNLSFTDRFANTTDLTVTNRVGLTQDSVSGIQAKGEAVINELGASFGFIIQGDFSTGFTITNRNQVGQAVDGTIWRYTGEIPDGGFIVAPGTTPSSPTYNQLVETDHNELTNRNAADAHDEIYNRSFDGVTQMLAYTSLSVGTRYSTGGTTWEYLGNTSGDISDFKPLSVVFAADFGVRTGLDASAIVASIAENFTNIELPTGELLWQGNGIISPLNNLTIYGNATTVRISRLAGKGDYAFMAGTADNVEVHSIDFIGSGVLPTQVNDPLDTFQRGLITLQGDNHKIHNINITDYWGYYNFFDFWHNNINIIGGGNHRLHDIVILNSGHEGIGMGNVHDSFIQRLHYSNDNSLFTALKVFPINDENDVTTCYENTLRDIYVRGAIGSSVDIGGIGSYCYNHRYDECRKGLNLDNEQFPDQPAVGEHKKIRIRGLEINGNNAADGYGLLITSAVKGDDIKVFDTTVKNINGGSFSINGFNDITVDGVDIETSFVGESIRVAGQSTNPTGKASVKNIVVNNSTDYTGEGAAFRFLSKITINDMELTDIGHVRFTTVDNIKIKRSSIDGFNGISIQISSPNEVSFKADDLTIDCGTTISTAHIRYVGTLTPKDITVKNSSFSDTTNSYAIDFGSNAATGRVNSYNNTANTTATLVFPRASGITVHSVNNDRGFESAINFGSGYLWVDSTGVVRTSVTSPTSDLAGVVVGSQT
Physico‐chemical
properties
protein length:736 AA
molecular weight: 79071,16650 Da
isoelectric point:4,74466
aromaticity:0,08832
hydropathy:-0,19823

Domains

Domains [InterPro]
DC_1559
ATT
1–191
DC_1559 IPR011050 IPR006626 DC_0672
G3DSA:2.10.10.80
ATT
75–124
G3DSA:2.10.10.80 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626
AUR95648.1
1 736
Architecture
ATT
STR
RBD
ATT 1-191 | STR 196-548 | RBD 622-736
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR95648.1
1 736
Domain Start End Length (AA) Confidence
N-terminal 1 212 212 0,9951
Central domain 213 691 480 0,9734
C-terminal 692 736 44 0,8826
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-212
Central
213-691
C-terminal
692-736

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.210.O._10N.222.52.C2
[NCBI] 		1881406 No lineage information
Host Vibrio sp. F13
[NCBI] 		2070777 Pseudomonadota > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR95648.1 [NCBI]
Genbank nucleotide accession
MG592580.1 [NCBI]
CDS location
range 12010 -> 14220
strand -
CDS
ATGGCTTCAATCGATATACCAAACGCATGCTCTACAAGTGCAAATGAGCCGGTCGGCACAACCTCGCTTGAGGCCGCTAGCTGCAACTTAAGCTTTACAGATAGATTTGCTAACACTACCGATTTGACAGTTACTAATCGAGTCGGTCTAACTCAAGATTCAGTCTCAGGGATTCAAGCTAAAGGTGAGGCTGTAATAAATGAATTGGGCGCTAGCTTTGGATTTATCATTCAGGGTGACTTTTCTACTGGATTCACTATCACCAATCGCAATCAAGTAGGGCAAGCAGTCGACGGAACTATATGGAGATATACCGGTGAAATACCCGATGGTGGGTTTATTGTCGCCCCAGGCACAACCCCATCATCACCAACTTATAATCAGTTAGTTGAAACAGATCATAATGAGTTGACAAACAGGAACGCTGCAGACGCTCATGATGAGATATACAACAGATCGTTTGATGGCGTTACCCAGATGCTAGCCTACACAAGCCTTTCAGTTGGCACAAGGTACAGCACAGGCGGCACTACATGGGAATACCTAGGTAATACATCAGGTGATATCTCAGACTTTAAGCCGTTAAGTGTGGTTTTTGCTGCTGACTTTGGTGTTAGAACTGGTCTTGACGCTTCAGCCATAGTTGCATCAATAGCGGAAAATTTTACAAACATTGAATTACCAACAGGCGAACTACTATGGCAAGGCAACGGAATTATATCCCCGCTAAACAACTTAACTATATACGGAAATGCCACAACAGTCCGAATTAGCAGGCTTGCTGGTAAGGGTGATTATGCTTTTATGGCTGGCACCGCAGATAATGTGGAAGTGCACTCTATTGATTTCATAGGTAGCGGTGTATTACCTACACAGGTTAACGATCCGCTCGACACTTTTCAGCGCGGCCTTATAACTTTACAAGGTGACAATCATAAAATACACAATATTAATATAACTGATTACTGGGGTTACTATAATTTTTTCGACTTCTGGCACAATAATATAAACATAATTGGCGGAGGCAATCACAGGCTGCATGATATTGTAATATTGAACAGTGGTCATGAGGGTATAGGAATGGGAAACGTTCACGATTCATTCATTCAGAGATTGCATTATTCTAATGATAATTCTCTTTTTACAGCGTTAAAAGTTTTTCCAATTAATGATGAAAACGACGTGACTACATGTTACGAAAACACATTAAGGGATATATATGTTAGAGGTGCTATTGGTTCATCTGTGGATATTGGAGGTATAGGATCTTACTGCTATAACCATAGATACGACGAGTGCAGAAAGGGGTTGAACTTAGATAATGAACAATTTCCAGATCAGCCAGCAGTGGGAGAACATAAAAAAATACGGATCAGAGGTCTAGAGATAAACGGAAACAATGCGGCGGACGGATATGGCCTGCTTATTACATCAGCGGTAAAAGGTGATGACATTAAGGTTTTCGATACTACCGTTAAAAACATAAATGGCGGAAGCTTTTCAATTAATGGCTTTAACGATATAACTGTAGACGGCGTTGATATTGAAACTAGTTTTGTTGGTGAGTCCATCAGAGTTGCAGGGCAATCAACTAACCCTACAGGCAAAGCATCAGTAAAGAACATTGTTGTTAACAACTCCACAGATTACACTGGAGAAGGTGCGGCATTTAGATTTCTTTCAAAAATTACAATTAACGACATGGAACTTACCGATATAGGTCATGTTAGATTTACAACCGTTGATAATATTAAAATTAAAAGATCTAGTATCGATGGGTTTAATGGGATATCTATACAAATCAGTTCGCCAAATGAGGTTTCATTTAAAGCAGACGATTTAACAATTGATTGCGGCACAACAATATCAACCGCGCATATACGATATGTAGGCACGTTAACACCTAAAGATATAACTGTAAAAAACTCAAGCTTTAGCGATACCACCAACAGCTACGCTATTGATTTTGGTAGCAATGCAGCAACAGGAAGAGTGAACAGTTACAACAATACGGCTAATACAACGGCGACTTTAGTATTCCCAAGGGCTTCGGGAATAACTGTCCATAGCGTTAACAATGATCGAGGTTTTGAAAGTGCGATTAACTTTGGTAGTGGTTACTTATGGGTCGATAGTACGGGGGTTGTAAGGACAAGTGTTACCTCTCCAACATCTGATTTGGCTGGGGTTGTTGTTGGCTCTCAAACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
35804543d17f37a5888b631263fdc622c4f51c7ddd504bcd847afbe20586fbfe
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8091
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank