Protein

View in Explore
Genbank accession
QIW88875.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MIKNSVVTGRKGGSSKPHTPQEMEDNLISINKIKVLLAVSDGEVDANFSLKDLYLNDVPVIAPSGEVNYEGVTAEFRPGTQTQDYIKGFNDTAAEFTVGRELKTTTPYVISVTNKQLSAVRVKILMPRGVTTKENGDMVGVVVKWAVDMAVDGGNYQEVLSDVIDGKTISGYDKTKRIDIPAFNSQVLLRVRRVTADSTDARVVDAINVQSYAEVIDAKFRYPLTGLVYVEFNSELFPQIPSISTKKKWKIINVPSNYDPVLREYSGTWDGSFKKAWSNNPAWVLYDLITNQRYGLDQRELGIAVDKWSLYDAGQYCDQKVPDGHGGTEPRYLCDVVIQSQVEAYNLVRDICSIFRGMSFWNGESLSIVIDRPREASYIFTNDNVVDGSFAYTFASEKSMYTTCNVTFDDEQNMYSQDIEGVFDLNASLRFGHNPTSITAIGCTRRSEANRRGRWVLKTNLRSTTVSFATGLEGMIPMIGDVVAIADNFWSSNLTLSLSGRVMEVSGLQVFTHFKVDARAGDFIIVNKADGNPVRRTISKVSADGKTIELNVGFGFDVQPNTVFAIDRTDVALQQYVVTGITKGDGDDEFTYSITAVEYDPNKYDEIDYGVNIDDRPTSIVDPDNMQPPKNIKVSSYSRIVQGMSVETMVISWDKVQYASKYDVQWRKDNGNWMNVPRTANKEVEVEGIYAGNYHVRVRSISSGGNTSPWSEVVSVGLTGKIGKPDKPTVVIASDDQVFGIRVKWGFPEGSGDTAYTELQQIPDNGAGGHAGEENASLLTMIPYPQYEYWHSTLPAGYVNWYRARLVDRIGNVSDWSDIVRGMASDDVESIIGEIKVDIENSEGFKYLQQNAIESNGAIQAQAESILENAIANDTDVRRMTKENGRRKAEYVQAVNLIADETQARVEALTQLKAQIDDEVVASITEVQTALATETEARTTADTALSAQLGDTQAALNEKLDSWVDAESAGAQYGVKLGLKYNGVEYSAGMSMELVGSGAGVKSQFIFDANRFAISNGVGSGSGQWALPFVVESNQVFIQSAVIKDGSITNAKIGNRIQSNNYVQGSHGWAIDKSGFAELSNATVRGSLYANNGNFAFNGTSNTVQINGNGITVNLPGGGRVVVGVWS
Physico‐chemical
properties
protein length:1127 AA
molecular weight: 123630,64220 Da
isoelectric point:4,88016
aromaticity:0,09051
hydropathy:-0,29423

Domains

Domains [InterPro]
DC_0014
STR
1–1127
DC_0014
IPR053171
Unmapped
3–881
IPR053171 Coil IPR015406
IPR055385
ATT
93–218
IPR055385 IPR032876 IPR036116
IPR013783
STR
627–721
IPR013783
IPR003961
STR
628–722
IPR003961
IPR003961
STR
628–716
IPR003961
IPR003961
STR
647–715
IPR003961
QIW88875.1
1 1127
Architecture
STR
ATT
STR
ATT
STR
STR 1-92 | ATT 93-218 | STR 219-339 | ATT 340-502 | STR 503-1127
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIW88875.1
1 1127
Domain Start End Length (AA) Confidence
N-terminal 1 503 503 0,8829
Central domain 504 1057 555 0,0628
C-terminal 1058 1127 69 0,7666
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-503
Central
504-1057
C-terminal
1058-1127

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage CJ19
[NCBI] 		2723904 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIW88875.1 [NCBI]
Genbank nucleotide accession
MT176427.1 [NCBI]
CDS location
range 11986 -> 15369
strand -
CDS
ATGATTAAAAATAGTGTAGTGACGGGCCGAAAGGGTGGCAGCAGCAAGCCGCATACCCCACAGGAGATGGAAGATAACCTGATCTCAATCAACAAGATTAAGGTTTTGCTCGCTGTTAGTGATGGCGAGGTTGACGCGAATTTCTCATTAAAGGACTTATATCTTAATGACGTTCCTGTAATTGCACCATCCGGCGAGGTTAACTATGAAGGCGTAACGGCTGAGTTTCGCCCTGGAACGCAGACTCAGGATTACATCAAAGGCTTCAACGACACGGCGGCTGAGTTCACTGTAGGCCGTGAATTGAAAACAACGACGCCTTACGTGATCTCGGTAACGAATAAACAGCTATCAGCCGTCCGCGTAAAAATCCTGATGCCTCGCGGCGTTACAACGAAAGAAAACGGCGATATGGTCGGCGTGGTCGTGAAGTGGGCCGTAGATATGGCGGTTGATGGCGGGAACTACCAGGAAGTTTTATCAGACGTCATCGACGGAAAGACCATTAGCGGATATGACAAAACAAAGCGAATCGACATCCCAGCGTTCAATAGTCAGGTTCTATTGCGTGTGCGCCGAGTTACGGCTGATTCAACTGATGCGCGTGTAGTTGACGCGATAAACGTTCAGTCATATGCGGAAGTGATTGATGCTAAATTCCGTTACCCTCTGACCGGTCTTGTTTACGTTGAGTTTAACAGCGAGTTGTTCCCGCAGATCCCAAGTATTAGCACGAAAAAGAAATGGAAGATCATCAACGTTCCTAGTAACTACGATCCAGTACTGAGAGAATATAGCGGCACATGGGATGGTAGTTTTAAAAAAGCATGGTCAAATAATCCGGCGTGGGTGCTTTATGATTTGATCACCAATCAGAGATACGGACTCGACCAAAGAGAACTAGGGATCGCGGTAGATAAGTGGTCACTCTATGACGCTGGTCAATACTGCGATCAGAAAGTACCAGACGGTCACGGCGGAACAGAGCCTCGCTATCTTTGCGATGTTGTGATTCAGTCTCAGGTTGAAGCGTACAATCTGGTGCGAGACATTTGCTCAATATTCCGAGGAATGAGTTTCTGGAACGGAGAGAGCCTTTCAATTGTCATCGACCGACCGAGAGAGGCGTCTTATATTTTCACTAACGATAACGTCGTTGATGGCTCATTTGCCTATACGTTCGCAAGTGAAAAAAGCATGTACACAACCTGCAACGTCACGTTCGACGACGAGCAGAACATGTACAGCCAGGACATTGAGGGTGTGTTCGACCTTAACGCCTCGTTACGCTTCGGTCATAACCCGACAAGCATCACAGCAATCGGATGTACTCGACGCAGTGAAGCGAATCGACGGGGCCGCTGGGTTCTCAAAACAAACCTTCGCAGCACGACGGTGAGTTTTGCAACTGGCCTTGAGGGTATGATTCCGATGATTGGCGACGTGGTGGCAATCGCTGATAACTTCTGGTCAAGCAACCTGACGCTTTCGTTATCAGGTCGCGTGATGGAGGTGTCTGGCCTGCAAGTGTTCACACACTTTAAGGTAGATGCACGCGCTGGTGATTTCATTATCGTGAACAAGGCTGATGGTAATCCGGTGCGCCGGACTATTTCAAAAGTGTCTGCGGACGGGAAAACGATTGAGCTTAACGTTGGGTTTGGCTTTGATGTTCAACCAAACACAGTATTCGCAATCGACCGCACTGATGTTGCCTTGCAGCAATACGTTGTAACCGGAATCACGAAGGGCGACGGCGACGATGAGTTCACGTACAGCATTACGGCAGTTGAATACGATCCGAACAAATACGACGAGATTGACTACGGCGTAAATATTGATGACCGACCAACCAGCATTGTAGATCCTGACAACATGCAGCCACCTAAAAATATCAAGGTGTCTTCATATTCAAGAATTGTCCAGGGAATGAGCGTAGAAACTATGGTCATCTCATGGGATAAAGTGCAGTACGCGAGCAAGTACGATGTGCAGTGGCGCAAGGACAATGGCAACTGGATGAACGTACCGCGCACAGCAAACAAAGAAGTCGAGGTTGAAGGGATTTACGCAGGCAATTATCACGTACGCGTAAGGAGCATCTCAAGCGGTGGAAATACGTCTCCATGGTCTGAAGTTGTCAGCGTCGGATTGACGGGTAAGATTGGGAAACCAGATAAACCAACAGTAGTAATAGCATCTGACGATCAGGTGTTTGGGATTAGGGTTAAATGGGGATTCCCTGAAGGCTCTGGTGATACTGCATACACGGAGTTGCAGCAGATACCAGATAATGGTGCTGGAGGTCACGCTGGTGAGGAGAATGCGAGTCTATTAACAATGATTCCATACCCACAGTACGAGTACTGGCACTCGACACTGCCAGCAGGATATGTGAACTGGTACAGAGCGAGATTAGTGGACAGAATTGGGAACGTATCTGACTGGTCTGACATTGTTCGAGGAATGGCTAGTGATGACGTGGAATCGATCATTGGTGAAATTAAGGTTGATATCGAGAATTCCGAGGGGTTTAAGTATCTACAGCAGAACGCCATTGAGTCAAACGGAGCTATTCAGGCGCAAGCGGAATCAATTCTTGAGAACGCCATTGCAAACGACACGGATGTGCGTCGAATGACTAAGGAAAACGGCAGGAGGAAGGCTGAATATGTTCAGGCAGTGAATCTTATTGCAGATGAAACTCAGGCTCGTGTAGAGGCTCTCACGCAGCTTAAAGCGCAGATTGATGATGAGGTCGTAGCCTCCATAACTGAAGTTCAGACGGCACTAGCAACCGAAACGGAAGCTAGGACTACTGCCGACACTGCTTTAAGCGCTCAGCTTGGCGACACGCAGGCCGCACTGAATGAAAAACTTGACTCATGGGTAGATGCTGAATCAGCTGGCGCTCAGTACGGCGTTAAATTGGGCCTCAAATACAATGGGGTTGAATATAGCGCAGGGATGAGCATGGAACTTGTTGGCAGCGGTGCTGGTGTTAAGAGTCAGTTCATATTTGACGCTAACAGATTCGCGATCAGTAATGGGGTTGGTTCTGGTTCCGGTCAGTGGGCATTGCCTTTTGTTGTTGAGAGCAACCAGGTGTTCATACAGAGCGCCGTAATCAAGGACGGTTCAATCACGAACGCTAAGATTGGTAACAGGATCCAATCTAACAACTACGTTCAAGGAAGTCATGGGTGGGCTATTGATAAATCTGGTTTTGCTGAACTAAGTAATGCCACCGTTAGAGGAAGCCTTTACGCTAACAATGGTAACTTCGCGTTTAACGGAACAAGCAACACTGTTCAGATTAACGGTAACGGAATCACTGTTAACCTGCCAGGTGGAGGAAGGGTTGTAGTTGGAGTATGGAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fa0ba4f879124ba53ed81742fc44e20806e4f27e57223617daeacd2fa6ccc4a4
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2900
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50