Protein

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Genbank accession
YP_009843474.1 [GenBank]
Protein name
receptor binding tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MGFFAGKYSDGKTVLSLNTESGGDINRHYSPNANSIFHSDMPFVLVDGTYEAALGNAGNGFFVCQMPSDIINIKSNDPGRVILTAIEINGTHRAFLNGTQSQVGQFTAFFEDPPIGRAGAEVGLTSAFASGNSLAHGTYIYNSGLGHEESIARQGTGGTISQASGFNLYRPGGAYAGEAIGRAWTLAGFPAGASTVPIDGGNADYWHPNWQAPIGAAHRGHNWFYVCNSNIRGYVGKKGTVPANVNLLYQSPTYPDKVYICKGSTSNLAAQAAKKVYVQDGYNITPTKVIWYVLNLRYSNGNMGVSGNPFTGSDILITPSNFTIKGVSLPNTGYKFINQNAFGNLGYRPDMEYIGNNAAYTGAFGDTTARCEIVGSSNGSLWSPVDYGGAKSQISIYKFGAGKQWYVNSSNNTIGNEHGAVWSPSTVPLRLFPNNVASTYVGDDITPTYPGAGNYYRALATIGLGLPNANATVILTTEVIMGNINTAGGAIRTYGGVAWQVQGRRQHSYTEGDGIFHQILTLPPGYLVPYHSTTAYSYTQTWASRPDELTFRRNGYIYTIKNLGNGNAELGVIIHADEAAAIFLPRLRVTVQRLT
Physico‐chemical
properties
protein length:595 AA
molecular weight: 63752,29610 Da
isoelectric point:8,40160
aromaticity:0,11765
hydropathy:-0,20908

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_HdH2
[NCBI] 		2508174 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009843474.1 [NCBI]
Genbank nucleotide accession
NC_048748 [NCBI]
CDS location
range 106933 -> 108720
strand -
CDS
ATGGGTTTTTTCGCTGGAAAATATAGCGATGGTAAGACCGTACTATCTTTAAATACTGAATCTGGTGGTGACATTAATCGTCACTATAGTCCAAATGCCAATAGTATTTTTCATAGTGATATGCCATTTGTCCTAGTTGATGGTACTTATGAGGCTGCATTAGGTAATGCCGGGAATGGGTTTTTTGTATGTCAAATGCCCTCTGACATAATAAATATTAAATCCAACGACCCAGGTAGAGTTATACTAACTGCTATTGAGATAAATGGTACTCACAGAGCTTTTCTTAATGGTACTCAATCTCAAGTTGGTCAATTTACTGCATTTTTTGAAGATCCGCCTATTGGTAGGGCAGGTGCAGAAGTAGGTCTTACGTCAGCTTTTGCATCCGGTAATAGTTTAGCACATGGCACCTATATTTATAACTCTGGTTTAGGGCATGAAGAATCAATTGCTAGGCAGGGTACAGGTGGTACCATATCTCAAGCCTCTGGGTTTAATTTATATAGACCGGGAGGAGCATATGCTGGTGAGGCTATAGGTAGGGCATGGACTTTAGCAGGATTTCCAGCAGGAGCGTCTACAGTACCTATAGATGGTGGTAATGCTGACTACTGGCACCCTAATTGGCAAGCTCCTATAGGGGCCGCCCATAGAGGGCATAATTGGTTTTACGTTTGTAACTCTAATATACGAGGTTATGTAGGTAAAAAGGGCACAGTACCGGCTAATGTTAACTTATTGTATCAATCTCCTACTTACCCTGATAAGGTTTACATATGCAAAGGTTCAACATCTAATTTAGCGGCACAGGCCGCTAAGAAAGTATATGTGCAGGATGGTTATAATATTACACCTACCAAAGTTATTTGGTATGTACTTAATCTAAGGTACTCTAATGGTAATATGGGCGTATCCGGTAATCCATTTACTGGGTCAGATATACTTATAACTCCATCTAATTTTACTATAAAAGGGGTTAGTTTACCAAATACTGGATATAAGTTTATCAACCAAAATGCTTTTGGTAACTTAGGCTATAGGCCAGATATGGAGTACATTGGAAATAACGCAGCGTACACTGGAGCCTTCGGGGATACTACTGCGCGCTGTGAAATTGTAGGATCTAGTAATGGATCTTTATGGTCTCCCGTAGATTATGGAGGGGCTAAGTCTCAAATTAGTATTTACAAATTCGGAGCGGGTAAACAATGGTACGTAAACTCAAGTAATAACACTATAGGTAATGAGCATGGAGCTGTGTGGAGTCCTAGTACTGTACCCTTAAGACTATTTCCTAATAATGTTGCTAGCACTTACGTTGGCGATGATATAACTCCAACATATCCTGGAGCAGGTAACTACTATAGAGCTTTGGCCACCATAGGATTAGGATTGCCTAATGCTAACGCAACAGTAATATTAACTACTGAAGTTATCATGGGGAATATTAATACCGCAGGAGGAGCTATACGCACATATGGTGGTGTTGCTTGGCAAGTACAAGGAAGAAGACAGCATAGTTACACGGAAGGTGATGGAATATTCCATCAAATATTAACCTTACCTCCTGGATACTTAGTCCCTTATCACTCCACTACTGCATACAGTTATACTCAAACTTGGGCAAGTAGACCTGATGAGTTAACATTTAGAAGAAACGGATATATTTATACTATTAAAAATCTAGGAAATGGTAATGCTGAATTGGGCGTAATTATTCACGCTGATGAGGCTGCAGCTATTTTCCTACCGAGATTAAGAGTAACAGTTCAACGCCTTACCTAA

Tertiary structure

PDB ID
d45ebeadfa2ff5a37be10b230888d988418271376cf710bf0a02caa158e6f514
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2540
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Still something new to discover - new insights into E. coli phage diversity and taxonomy Korf,I.H.E., Adriaennsens,E., Dreiseikelmann,B., Kropinski,A., Nimtz,M., Meier-Kolthoff,J.P., Rohde,M., van Raaij,M. and Wittmann,J. 2019-05-17 — GenBank