Protein

View in Explore
Genbank accession
QBX27406.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence RBPdetect
Probability 0,84
TF
Evidence Phold
Probability 1,00
Protein sequence
MQITFYDKNMFETAVADNALMNAIKIKKASLTSLFEEATHQVEFEFSKEFGEWWGIKENGYLAFRFKGDFFRFSIVKFKEDAKTNTITIVGDYFNLEMLNENCIAYEKQPARTIVQHLTAMEILPYANFEIGVNELANSTRVLTYTGDEVKYKRLISTINNFGGECEFEIKQKANGQFDKLILNIYKANDGVNYQGVGRNRRDLEITIDNSNNVSRMVDSTEIKTSIEPIGKDGLRLGNRGTTWKNEDGQVEFYQKITVSMHH
Physico‐chemical
properties
protein length:263 AA
molecular weight: 30263,86090 Da
isoelectric point:5,55836
aromaticity:0,11787
hydropathy:-0,46084

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan386
[NCBI] 		2548142 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX27406.1 [NCBI]
Genbank nucleotide accession
MK448925.1 [NCBI]
CDS location
range 29831 -> 30622
strand +
CDS
GTGCAGATTACTTTTTATGATAAAAATATGTTTGAAACTGCGGTTGCAGACAATGCATTAATGAATGCAATAAAAATCAAAAAAGCATCCCTAACCTCGTTATTTGAGGAGGCAACTCATCAGGTTGAGTTTGAATTTTCAAAAGAGTTCGGTGAATGGTGGGGGATCAAGGAAAATGGCTATTTAGCTTTTAGATTTAAAGGTGATTTTTTCAGGTTCTCGATCGTCAAATTCAAGGAAGATGCAAAGACCAATACTATAACTATTGTTGGTGACTACTTTAATTTAGAAATGCTAAACGAAAACTGTATTGCTTATGAAAAGCAACCAGCTAGAACAATTGTTCAGCATCTTACTGCGATGGAGATTTTGCCTTATGCAAACTTTGAAATTGGTGTCAATGAGCTTGCAAATAGCACTAGAGTTCTAACATATACAGGTGATGAGGTTAAATATAAACGTTTAATCTCTACCATCAATAATTTTGGTGGTGAGTGTGAGTTTGAAATCAAGCAAAAAGCAAACGGTCAATTTGATAAACTTATCCTGAATATCTACAAAGCAAACGATGGTGTTAACTATCAAGGTGTTGGTCGTAATAGACGAGATTTAGAAATCACTATTGACAATTCAAATAATGTTAGTCGTATGGTTGACTCAACTGAAATCAAAACATCAATTGAGCCAATAGGTAAAGATGGTCTTAGGTTAGGTAATAGAGGGACAACTTGGAAAAATGAAGATGGCCAAGTTGAGTTTTACCAAAAAATAACCGTATCTATGCACCATTAG

Tertiary structure

PDB ID
11fdea1a412650bbdca153215659e1c5c7fb722d10fb5b935898ac7d874dcb0c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8691
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank