Protein

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Genbank accession
AEC52963.1 [GenBank]
Protein name
phage tail collar domain-containing protein
RBP type
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MPLLDTDQLVVARSGTNYRMSAEELKTYAGGLAVVGPTAPSSPATGRLWYNTTSGRLNIFNGTAWVDASPSVGGGGSVAPGTVAFIAGNFAPAGWLKANGAILTRSVYSDLFAAIGTTFGAGNGSTTFAIPDLRGEFIRCWADGRAAGTWPEGSRVFGTFQNESFLNHGHGVNDPSHAHGVFDPGHTHGYARQDWGAPANIGIQYIVGQAQNSQTAPSGTGIGIFGNFTGISIQANGGNETRPRNIALLAIIKF
Physico‐chemical
properties
protein length:254 AA
molecular weight: 26357,96430 Da
isoelectric point:7,01776
aromaticity:0,10236
hydropathy:-0,07795

Domains

Domains [InterPro]
IPR037053
75–134
IPR037053
SSF88874
77–253
SSF88874
IPR011083
81–138
IPR011083
AEC52963.1
1 254
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CRM01
[NCBI] 		1026955 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp.
[NCBI] 		1131 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AEC52963.1 [NCBI]
Genbank nucleotide accession
HQ615693 [NCBI]
CDS location
range 22561 -> 23325
strand +
CDS
ATGCCTTTACTAGATACTGACCAATTAGTTGTCGCAAGATCGGGAACCAACTATAGAATGTCAGCGGAAGAATTAAAAACTTACGCAGGCGGATTGGCAGTAGTCGGTCCCACAGCCCCTAGTAGTCCTGCAACAGGAAGACTATGGTATAACACAACTTCCGGTAGACTTAATATATTTAATGGTACGGCTTGGGTAGATGCATCTCCGTCAGTTGGTGGGGGCGGATCAGTTGCACCAGGAACAGTTGCGTTTATTGCAGGAAACTTTGCGCCTGCAGGTTGGTTGAAAGCCAACGGAGCAATACTCACTCGTTCTGTATATTCTGATCTATTTGCAGCAATTGGTACAACTTTTGGAGCTGGAAATGGATCCACAACATTTGCAATTCCAGATCTCCGTGGTGAATTTATAAGATGTTGGGCTGATGGCCGAGCTGCTGGTACATGGCCAGAAGGAAGTAGAGTATTTGGTACATTCCAAAACGAATCATTCTTAAACCATGGCCATGGCGTTAATGACCCAAGCCATGCTCATGGTGTATTCGATCCGGGGCACACTCATGGTTATGCTCGCCAAGACTGGGGTGCACCAGCCAATATCGGTATTCAATATATTGTAGGTCAAGCTCAAAACTCACAAACTGCACCATCCGGCACCGGTATTGGTATTTTTGGAAATTTCACTGGTATTTCTATTCAAGCAAATGGTGGAAATGAAACCAGACCACGTAACATTGCCCTGTTGGCCATTATTAAATTCTAA

Tertiary structure

PDB ID
ae7374e507d8e84d2939080c1e382a4470cdba9d0a65b67d2a94b7353c25e7c3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7758
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50