Protein

View in Explore
Genbank accession
QPI16117.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,78
Protein sequence
MTDKLIRELLIDVKQKGATRTAKSIENVSDALENAAAASELTNEQLGKMPKTLYSIERAADRAAKSLTKMQASRGMAGITKSIEGIGDKLDDLALAMIEVSEKLESGFTHVGKSVKAMGNDVAAATEKVQDRLYDTNRALGNTARGFNDTTTSAGRASRAIGNTSGSARGATRDFAAMAKVGGSLPLMYAAIASNVFVLQSAFEQLKMGDQLNRLEKFGTIVGTQTGTPVQTLARSLQEAAGYAISFEEAMRQASSASAYGFDAEQLNKFGLVARRAAAVLGVDMTDALNRVIKGVSKQEIELLDELGVTIRLNDAYADYVKQLNAANTGITYNVNSLSTFQKQQAYANAVIAESTKRFGYLDDVLRATPWEQFAANADAALRKVQQAAAKYLGPVIDSINAVFYTSQASISASAARAQEETNRQIDPANVGAVALSLSASEEGYNKALDMYKESLEKRNKLKADLDKRMQQADASTAGAIRLVAQGAPVGLAAGGFEVGGVRIGSSEENQKFIADTAALALQVERLDKEVEDSTGNLNAWKSAYQAAGAAAAKSNTAFQKQINLQKDANDPDAVYDFNSATLKGLTEQQKAYDQAKKTASDLANDIQNIAQNTNTAAKTSASLSDTIKTIESLSAGTGKNADEYVKSLNLGYNTLSEMKTASQALAGYVKLTGNETKNQLEVQQKIAEVYNQTKDKEKAQEAGRRLEIQQLEEQEAALKRVLETNKGNKAIENEIAKVQLERIKITNQDMEAQKKVKDYTDKILGVDREIALLNNRTMTDTQYRLAQLNLELTIEKEKYVWYSKQIDKQKEAEQSRRAQAQIEREIWKARLDNISRVAAKRQEAFENTLTGMYPLAGEMQKMEMQLEFYKQMKEFTKGNADEQMRWNSEISKTQAQMSALAAQRNAQMQQQVGSSVGATYTPTTGLSGDDKAFADMQNRMASYDQAISKLSELNSEATAVAQSMGNLTNAMIQFSQGSLDTTSLVAAGMQTVSSMIQYSVGQQVSAIDAAIAAEQKRDGKSEQSKAKIKKLEAEKLKIQQDAAKKQIIIQTAVAVMQAATAVPYPFSIPLMVAAGLAGAMALAQASSASGMSSIGDSGAETAGYLTLGERQKNVDVSMSANAGELSYIRGDQGIGNANSFVPRAEGGNMYPGVSYQMGEHGTEVITPMVPMKATPTDELKGSSKGTSGRPIVLNISTMDAASFRDFASSNSAAFRDAVEQALNENGTTLKSLGNS
Physico‐chemical
properties
protein length:1236 AA
molecular weight: 133004,93300 Da
isoelectric point:5,87456
aromaticity:0,05421
hydropathy:-0,41788

Domains

Domains [InterPro]
IPR056207
1–81
IPR056207 Coil Coil Coil IPR056208
QPI16117.1
1 1236
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SP76
[NCBI] 		2785525 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPI16117.1 [NCBI]
Genbank nucleotide accession
MW206381.1 [NCBI]
CDS location
range 98720 -> 102430
strand +
CDS
ATGACTGATAAGCTAATACGAGAACTACTTATAGATGTAAAGCAGAAAGGGGCAACCCGTACTGCAAAATCTATCGAGAACGTTTCCGATGCGTTAGAAAATGCTGCTGCCGCTTCCGAACTGACTAATGAGCAGTTAGGAAAAATGCCCAAAACTCTTTACTCCATTGAGAGGGCGGCGGATAGAGCAGCTAAAAGTCTAACTAAAATGCAGGCTAGTAGAGGTATGGCTGGTATCACTAAATCCATTGAAGGTATTGGTGATAAGCTAGATGATCTTGCCCTTGCTATGATCGAAGTATCTGAGAAGCTAGAGTCTGGATTTACACATGTGGGTAAATCTGTTAAGGCTATGGGTAACGATGTAGCTGCTGCAACCGAAAAAGTTCAAGATAGATTATATGATACTAACCGAGCACTAGGCAATACTGCTAGAGGCTTTAACGATACAACTACCTCCGCAGGACGTGCTAGTCGTGCAATTGGTAATACTTCTGGTTCAGCACGTGGTGCTACTCGTGACTTCGCAGCAATGGCTAAAGTGGGTGGTAGTTTACCTCTTATGTATGCTGCTATCGCGTCTAACGTGTTCGTTCTACAATCTGCATTCGAACAACTTAAGATGGGTGACCAGTTAAACCGTCTTGAGAAGTTTGGTACTATTGTTGGTACTCAAACAGGTACTCCTGTACAAACTCTAGCTAGATCTCTACAAGAGGCTGCTGGTTATGCAATCTCCTTCGAAGAAGCAATGAGACAGGCATCCTCTGCTTCTGCATATGGATTCGATGCTGAACAACTTAATAAATTTGGTCTAGTAGCTCGTCGTGCTGCTGCTGTTCTTGGTGTTGATATGACTGATGCACTTAACCGTGTAATCAAGGGTGTATCTAAACAAGAAATCGAACTTCTGGACGAACTTGGTGTTACTATTCGTCTTAACGATGCTTACGCAGACTACGTTAAACAGTTAAATGCTGCTAACACAGGTATTACATATAACGTTAATAGTCTCTCTACTTTCCAGAAGCAACAAGCATATGCTAACGCAGTTATCGCTGAATCTACTAAACGTTTCGGCTATCTTGATGATGTACTTCGTGCAACCCCCTGGGAACAGTTTGCTGCTAATGCTGATGCTGCACTGAGAAAGGTTCAACAGGCTGCTGCTAAGTATTTAGGGCCAGTAATTGATTCTATCAACGCAGTGTTCTATACTTCTCAAGCATCTATCTCGGCCTCTGCTGCTAGAGCACAGGAAGAAACTAACCGCCAGATTGACCCAGCTAACGTTGGTGCTGTAGCTTTAAGTCTTTCCGCTTCTGAGGAAGGATATAATAAAGCTCTTGATATGTACAAAGAATCTCTAGAAAAGCGTAATAAGTTAAAAGCTGATCTAGACAAGCGTATGCAGCAAGCAGATGCATCTACAGCAGGGGCTATTCGTTTAGTTGCTCAAGGTGCACCGGTAGGGTTAGCTGCAGGAGGTTTTGAAGTAGGAGGAGTTCGCATAGGATCTTCTGAAGAAAACCAGAAATTCATTGCAGATACTGCTGCATTAGCTCTCCAGGTAGAGCGTCTTGATAAGGAAGTAGAGGATTCAACTGGCAATCTTAATGCATGGAAATCGGCATACCAAGCTGCTGGTGCTGCCGCAGCCAAATCTAATACAGCATTCCAGAAGCAAATTAACCTACAGAAAGATGCAAATGACCCGGATGCGGTTTATGACTTTAACTCTGCAACTCTGAAAGGATTGACAGAACAGCAGAAAGCGTATGACCAAGCTAAGAAAACTGCCAGTGACTTAGCTAACGATATCCAGAACATCGCTCAGAATACTAATACTGCGGCTAAAACTAGTGCATCCCTATCAGATACGATTAAGACTATTGAGTCTCTTTCTGCGGGTACTGGTAAAAATGCTGATGAGTATGTTAAGAGCCTGAACTTAGGGTATAATACTCTTAGTGAGATGAAGACTGCTTCACAAGCTCTTGCTGGTTACGTAAAATTAACTGGTAATGAGACTAAGAATCAGTTAGAAGTTCAGCAGAAGATTGCCGAAGTGTACAACCAGACCAAGGATAAAGAGAAAGCACAGGAAGCGGGTAGACGTCTAGAAATCCAACAGTTAGAAGAACAGGAAGCAGCTCTTAAGCGTGTCCTAGAAACTAACAAGGGTAACAAGGCAATTGAGAATGAAATAGCTAAGGTTCAGTTAGAACGTATAAAAATTACTAACCAGGACATGGAAGCTCAGAAGAAAGTTAAGGACTATACGGATAAGATTCTTGGTGTTGATCGTGAAATAGCTCTCCTGAATAACCGTACTATGACAGATACTCAATATCGTTTAGCTCAGTTGAACCTTGAACTGACTATCGAGAAAGAGAAGTATGTGTGGTACTCCAAGCAGATTGATAAGCAGAAGGAAGCTGAACAATCAAGACGTGCTCAGGCACAGATTGAGCGTGAAATCTGGAAAGCTAGGTTAGATAATATATCCAGAGTTGCAGCAAAAAGACAGGAAGCATTTGAGAATACATTAACTGGCATGTACCCTCTAGCAGGGGAAATGCAAAAGATGGAAATGCAGTTAGAATTCTATAAACAAATGAAAGAGTTTACTAAAGGTAATGCGGATGAACAGATGCGATGGAATTCTGAGATATCAAAAACTCAAGCACAAATGTCCGCATTAGCAGCCCAAAGAAATGCTCAAATGCAACAACAAGTAGGTTCATCTGTAGGAGCTACATATACACCTACAACTGGACTATCTGGAGATGACAAAGCTTTCGCGGATATGCAGAATAGAATGGCATCCTATGACCAGGCTATCTCTAAACTATCCGAGCTGAACTCTGAAGCAACTGCAGTGGCACAAAGTATGGGTAACCTAACTAATGCTATGATTCAGTTCTCTCAGGGATCTCTGGATACTACATCTTTAGTTGCTGCTGGTATGCAAACTGTGTCTTCAATGATTCAGTATAGTGTTGGTCAACAGGTAAGTGCTATTGATGCAGCTATTGCAGCAGAACAGAAACGTGATGGTAAATCTGAGCAATCCAAAGCTAAGATCAAGAAGTTAGAGGCTGAAAAGCTCAAGATCCAGCAAGATGCAGCTAAGAAGCAAATCATTATCCAGACGGCAGTAGCGGTGATGCAAGCAGCAACAGCTGTTCCATACCCATTTTCTATTCCTCTGATGGTTGCGGCTGGTTTAGCAGGTGCTATGGCTCTTGCTCAAGCATCCTCTGCATCTGGTATGTCTTCTATTGGGGACTCTGGTGCTGAGACAGCTGGTTACTTAACTCTTGGAGAGCGCCAGAAGAACGTAGACGTTTCTATGTCGGCTAACGCAGGAGAACTTTCTTATATTCGAGGGGATCAAGGGATTGGTAATGCTAACTCTTTCGTACCTCGTGCAGAAGGTGGTAATATGTATCCTGGAGTTAGTTACCAGATGGGTGAGCATGGTACCGAAGTAATCACTCCTATGGTTCCGATGAAGGCTACTCCTACTGATGAACTCAAAGGATCTTCAAAGGGTACATCGGGTAGACCTATTGTGCTGAACATCAGTACGATGGATGCGGCTAGCTTCCGAGACTTTGCTTCGAGCAACAGTGCTGCTTTCAGGGATGCCGTGGAACAGGCTCTTAATGAGAATGGAACCACCCTGAAATCACTTGGTAATTCTTAA

Tertiary structure

PDB ID
ede6d81bf3351ea4bcd5253e0880341ca435d1aa2d288eb46bb66e7bacd19958
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6289
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Biological properties and genomics analysis of a demerecviridae phage SP76 which could lytic multiple-serotypes in Salmonella Wang,H. and Zhang,W. 2022-02-15 — GenBank