Protein
View in Explore- Genbank accession
- UXE03198.1 [GenBank]
- Protein name
- membrane protein
- RBP type
-
TSP
- Protein sequence
-
MRAWLVLCAMSMLQFFIAVDVTVVNIALPSIGADLGVGGHSLTWVVVGYTITGGGLLMLGGRLGDLLGRRRTLLVGTSVFGAASLLAGLAPSFPVLVAARLLQGAGEAVALPAAMATIVLLFPEGPRRSRALSVWAAVASCGLVLGFALSGIITAHLGWRWVFLVSVPFILVVIVAALLLVPADRPASGGRCRLDLPGSLLLTACPLLFVYAAVEAGEPATGLWVSGVALVCAVLAAAGFVRVESRSPNPLVPLTFFADRARLRANLTTMLLSGALSTSFLLFTFYLQDRLGIGPLGAGLTMLPLAVALIVASVLVPRLLGHWGARACVLVGLAAAAGAMGVVALVAVLDGGAVWLLPAMLLIAAGMGFGLVGLQYIAVSGTTEEDAGIASGVQRASDQLGGATGVAVYVGLGFAPALHSGDPFVVAAVLAVIGLVVGAVVISRSPSTAAGQPQVG
- Physico‐chemical
properties -
protein length: 456 AA molecular weight: 46086,35110 Da isoelectric point: 9,11707 aromaticity: 0,06798 hydropathy: 1,10417
Domains
Domains [InterPro]
IPR036259
STR
2–442
STR
2–442
PTHR42718
Unmapped
3–442
Unmapped
3–442
G3DSA:1.20.1720.10
STR
5–243
STR
5–243
IPR020846
STR
6–446
STR
6–446
PR01036
Unmapped
9–33
Unmapped
9–33
IPR011701
STR
11–405
STR
11–405
cd17321
STR
14–434
STR
14–434
1
456
Architecture
STR 2-452 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
456
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 254 | 254 | 0,7853 |
| Central domain | 255 | 445 | 192 | 0,2248 |
| C-terminal | 446 | 456 | 10 | 0,9925 |
Note: Constraints were applied during segmentation.
Fixed 23 C-terminal predictions appearing before Central domain|Sequence started with non-N-terminal domain|C-terminal too short, adjusted boundary
Fixed 23 C-terminal predictions appearing before Central domain|Sequence started with non-N-terminal domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-254
1-254
Central
255-445
255-445
C-terminal
446-456
446-456
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Mycobacterium phage Nikao [NCBI] |
2978482 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
UXE03198.1
[NCBI]
Genbank nucleotide accession
OP297530
[NCBI]
CDS location
range 32314 -> 33684
strand -
strand -
CDS
GTGCGCGCATGGCTCGTGCTGTGCGCGATGTCGATGCTGCAGTTCTTCATCGCGGTCGACGTGACCGTGGTCAACATCGCGCTGCCCTCGATCGGCGCGGACCTCGGCGTCGGGGGACACTCCCTGACCTGGGTCGTGGTCGGCTACACCATCACCGGCGGAGGGCTGCTGATGCTCGGCGGTCGGCTCGGTGACCTTCTCGGCCGCCGCCGCACCCTCCTGGTCGGCACGAGCGTCTTCGGCGCGGCCTCCCTGCTGGCTGGCCTGGCCCCGTCCTTTCCGGTCCTGGTCGCGGCCCGCCTGCTCCAGGGCGCGGGCGAGGCTGTCGCGCTGCCCGCGGCGATGGCGACCATCGTGCTGCTCTTCCCCGAGGGGCCGCGCCGCTCACGGGCCCTGAGTGTGTGGGCGGCCGTGGCCAGCTGCGGCCTGGTTCTCGGGTTCGCCCTGTCAGGGATCATCACCGCCCACCTGGGCTGGCGCTGGGTCTTCCTGGTCTCGGTGCCCTTCATCCTGGTCGTGATCGTGGCCGCGCTGCTCCTGGTACCGGCCGACCGGCCCGCGTCCGGGGGACGGTGCCGCTTGGACCTTCCCGGTTCGCTCCTGCTGACCGCGTGCCCGCTGCTGTTCGTCTACGCCGCGGTCGAGGCGGGCGAGCCTGCCACCGGCCTGTGGGTCAGCGGGGTCGCGCTGGTGTGCGCGGTGCTGGCTGCTGCCGGGTTCGTGCGGGTCGAGTCGAGGTCGCCGAACCCGCTGGTCCCGCTGACCTTCTTCGCCGATCGGGCCCGGCTGCGGGCGAACCTGACGACGATGCTGCTCAGCGGTGCGTTGTCGACCTCGTTCCTGCTGTTCACGTTCTACCTGCAGGACAGGCTCGGTATCGGGCCTCTGGGGGCAGGCCTGACGATGCTGCCCCTGGCCGTGGCGCTGATCGTGGCCTCGGTGCTCGTGCCTCGGCTGCTGGGACACTGGGGCGCACGCGCCTGCGTGCTGGTCGGCCTGGCAGCGGCTGCCGGCGCGATGGGCGTGGTCGCGCTCGTGGCCGTCCTGGATGGTGGAGCGGTGTGGCTGCTCCCGGCGATGCTACTGATCGCAGCGGGCATGGGCTTCGGGCTCGTGGGTCTGCAGTACATCGCAGTCAGCGGCACCACCGAGGAGGACGCCGGGATCGCCTCCGGCGTCCAGCGAGCATCTGACCAGCTCGGCGGAGCAACCGGGGTGGCCGTCTACGTCGGCCTCGGGTTCGCACCGGCCCTGCACTCCGGGGACCCGTTCGTGGTCGCTGCGGTGCTCGCCGTTATCGGGCTGGTCGTCGGTGCCGTGGTCATCTCCCGCTCGCCGTCCACCGCGGCGGGGCAGCCGCAGGTCGGGTAG
Genome Context
Genome Context
Tertiary structure
PDB ID
13c2dbe58b580f6afd15e4296bcce4244196677cc44fc1374741cfbec0d60093
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50