Protein

View in Explore
Genbank accession
AEV52100.1 [GenBank]
Protein name
putative tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,55
Protein sequence
MTTPGALPPEGAYQNGDEYGTDLTEETARALVTQPYHNSYGGLPAAFMTGIGSFIGRALDGNPENDPTIGEVADYFIGWNRINAANASKIAQLENRLASGSTFMDDFARPNNLNALGNGWVQGGQGQGLGVYDNAARIDNTEIIGIDSGRRWAICPVMAAEDNVAVTAVVNPKGVAVPTMTSLFIRADENLTKFVYANVYGRSVYMGYGTRNGNTWVFNDWKSNTNYRLSEGSSVELAADSNVYRLTIDGVVVLEHTDTAGAVPVDATRRTVGFASETKIVNLLPSYSWGLAAFSHRPITFADMDGLRKAAEDALKAAEDAQGTVEGVQAAFAEYVAGQEAASNEGAFFIEDFSKLDDQPDMGPNWTVSQTGNVAIKGGAVGYQVAGESSATRAVFAQKPTNDDHYARALIATSTWDDTYTGLIVRGNDSMSQYVFARFYKGKIEIGTGTTGYVETVQYTKTGLSITAGSMVELRAVGNTYYVLVNSAVRGQVTLSALFGPNYRRTGMMLSRHQGAFWISYVTHVRMFITGDYAAPAFVGTGWSFWRLNNAADQSSGTTSGDKVFGDTVFDQVGPETRNVKRINDGAGIVEIEVPGWYQIDGRMKSDYSLTSDGSTSGTTLQAHINFINDETQPTYIIARAGGSVEGASMAEVSGLVYLQKGNRVRMGFYRSSGNMDPIGAPLGAATRFSGTLITSLKGARGETGAQGDVGPQGPIGEGLHFDLLVNTVAALPVSAVELTQALVKENGRIYLFKDGAWIEGPVLTGPKGDEGPSGPPNSLIVGSVTTGAEGSNASVSITGSAPMQVLNMTIPRGATGPTGPQPPLQKVTTLPATGVVGTIYWIEE
Physico‐chemical
properties
protein length:845 AA
molecular weight: 89675,86340 Da
isoelectric point:4,89477
aromaticity:0,09112
hydropathy:-0,17905

Domains

Domains [InterPro]
DC_1994
ATT
56–302
DC_1994 Coil DC_1340
DC_0667
STR
285–700
DC_0667
AEV52100.1
1 845
Architecture
ATT
STR
ATT 56-302 | STR 303-843 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AEV52100.1
1 845
Domain Start End Length (AA) Confidence
N-terminal 1 115 115 0,8864
Central domain 116 349 235 0,5013
C-terminal 350 845 495 0,5245
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-115
Central
116-349
C-terminal
350-845

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhodococcus phage RGL3
[NCBI] 		2922221 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Rhodococcus globerulus
[NCBI] 		33008 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Mycobacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AEV52100.1 [NCBI]
Genbank nucleotide accession
JN116826 [NCBI]
CDS location
range 16114 -> 18651
strand +
CDS
GTGACTACCCCAGGCGCACTGCCCCCCGAAGGGGCGTATCAGAACGGCGACGAGTACGGCACCGACCTGACCGAGGAGACGGCCAGGGCACTGGTCACTCAGCCTTACCACAACAGCTACGGGGGCCTCCCCGCTGCGTTCATGACCGGCATCGGCTCGTTCATCGGACGAGCCCTGGACGGCAACCCCGAGAACGATCCGACGATCGGAGAGGTCGCGGACTACTTCATCGGATGGAACCGCATCAACGCGGCCAACGCATCCAAGATCGCACAACTGGAGAACCGCCTCGCGTCGGGCTCCACGTTCATGGACGACTTCGCTCGTCCCAACAACCTGAACGCACTCGGCAACGGCTGGGTCCAGGGTGGACAGGGCCAGGGCCTGGGCGTTTACGACAACGCGGCCCGGATCGACAACACGGAGATCATCGGCATTGACAGTGGCCGGCGCTGGGCAATCTGCCCGGTCATGGCAGCCGAGGACAACGTCGCGGTGACGGCGGTCGTCAACCCGAAGGGTGTGGCTGTCCCCACCATGACCTCCCTGTTCATCCGAGCAGACGAGAACCTCACGAAGTTCGTCTACGCCAACGTCTATGGGCGCTCGGTCTACATGGGCTACGGCACCAGGAACGGCAACACGTGGGTGTTCAACGACTGGAAGTCGAACACGAACTACCGCCTGTCGGAGGGGTCCAGTGTCGAACTGGCTGCCGACTCGAACGTCTACCGCTTGACAATAGACGGAGTCGTGGTCCTGGAGCACACCGACACCGCTGGAGCCGTCCCCGTGGACGCCACCCGGCGCACGGTCGGCTTCGCATCGGAGACCAAGATCGTCAACCTGCTCCCGAGCTACTCGTGGGGCCTCGCTGCGTTCTCGCACCGGCCCATCACGTTCGCGGACATGGACGGGCTCCGCAAGGCTGCGGAGGACGCATTGAAGGCGGCAGAGGACGCACAGGGCACCGTAGAGGGTGTCCAGGCTGCGTTCGCTGAGTACGTTGCCGGCCAGGAGGCCGCGTCCAACGAGGGCGCGTTCTTCATCGAGGACTTCTCGAAGCTGGACGACCAGCCCGACATGGGTCCGAACTGGACTGTGAGCCAGACGGGCAACGTCGCTATCAAGGGCGGTGCCGTTGGTTACCAGGTCGCTGGCGAGAGCTCCGCGACCCGTGCCGTGTTCGCCCAGAAGCCCACGAACGACGACCACTACGCACGAGCCCTGATTGCCACGAGCACGTGGGACGACACGTACACCGGCCTGATCGTCCGGGGCAACGACAGCATGAGCCAGTACGTCTTCGCCCGGTTCTACAAGGGCAAGATCGAAATTGGCACTGGCACAACGGGTTACGTCGAAACCGTCCAGTACACGAAGACCGGACTGTCCATCACGGCAGGTTCGATGGTGGAGCTCCGAGCTGTCGGCAACACGTACTACGTGCTGGTCAACTCCGCTGTCCGTGGTCAGGTGACCCTCTCGGCCCTGTTCGGTCCGAACTACCGGCGTACCGGCATGATGCTGAGCCGCCACCAGGGCGCGTTCTGGATCTCGTACGTGACGCACGTCCGCATGTTCATCACGGGTGACTACGCCGCGCCGGCCTTCGTCGGCACCGGCTGGTCGTTCTGGCGACTGAACAACGCTGCGGACCAGAGTTCTGGCACCACGTCCGGTGACAAGGTGTTCGGCGACACGGTCTTCGACCAGGTCGGCCCCGAGACCCGCAACGTCAAGCGGATCAACGACGGCGCTGGAATCGTGGAGATCGAAGTCCCTGGCTGGTACCAGATCGACGGTCGCATGAAGTCGGACTACTCCCTCACGTCGGACGGCAGCACGTCGGGTACGACGCTCCAGGCGCACATCAACTTCATCAACGACGAGACTCAGCCGACGTACATCATTGCGCGAGCAGGTGGCTCGGTCGAAGGCGCGAGCATGGCCGAGGTTTCCGGCCTGGTGTACCTCCAGAAGGGCAACCGGGTTCGGATGGGCTTCTACCGCTCGTCCGGCAACATGGACCCGATCGGTGCTCCGCTGGGAGCGGCCACCCGGTTCTCCGGGACGCTCATCACGTCGCTCAAGGGCGCACGAGGCGAGACCGGAGCCCAGGGCGACGTTGGCCCCCAGGGGCCTATCGGTGAGGGTCTGCACTTCGACCTGCTCGTCAACACGGTGGCAGCACTGCCTGTCTCGGCTGTGGAGCTCACACAGGCTCTCGTGAAGGAGAACGGGCGGATCTACCTGTTCAAGGACGGGGCATGGATCGAAGGTCCGGTGCTCACCGGCCCGAAGGGTGACGAAGGACCGTCTGGTCCTCCGAACTCCCTGATCGTCGGCAGCGTCACCACGGGTGCAGAGGGCTCGAACGCCTCTGTGTCGATCACGGGCTCCGCACCCATGCAGGTGCTGAACATGACCATCCCGCGAGGTGCGACCGGTCCTACGGGACCGCAGCCGCCGTTGCAGAAGGTCACCACCCTTCCCGCTACCGGCGTAGTCGGGACTATCTACTGGATCGAAGAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
bc5281fe2432ff6c4481e098cb9dfe766aed1f3f594d903330b461286a7ffcdf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7403
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and whole genome sequences of the Rhodococcus bacteriophages RGL3 and RER2 Petrovski,S., Seviour,R.J. and Tillett,D. 2013 23129131 GenBank
Genome sequence and characterization of the Rhodococcus bacteriophages REQ1, RGL3 and RER2 Petrovski,S. 2012-11-06 — GenBank