Protein

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Genbank accession
CCP51197.1 [GenBank]
Protein name
putative tail collar protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,80
Protein sequence
MPRDSNGNTNPLLGTIVQTGDTILPSQHNPALVDLYAMMTQSLSRDGQGGMRANLAMNGFQVTGLGNATQPGNAVPLSQFQSGTPVGAVIDYAGVNPPNTWQFCFGQAIEVSAYPDFVAACYVGNALNATAGFGYRTTSQTDPSNNRSTSGQFIVLPDLRGRVGAGKDDMGGSAANRVTTTGSGINGALIGSNGGEQNSTLTIDQIPNHDHGGSTGNGVGSYTILNVLKNLTGNLSLSTNGQVGFTNENIPFSTHNHPISPQGGGLPHNNMQPTVIINKIIKVSY
Physico‐chemical
properties
protein length:285 AA
molecular weight: 29533,37470 Da
isoelectric point:6,01347
aromaticity:0,05965
hydropathy:-0,27053

Domains

Domains [InterPro]
SSF88874
81–283
SSF88874
IPR037053
83–164
IPR037053
CCP51197.1
1 285
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Brucella phage Tb
[NCBI] 		1133292 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Brucella abortus 544
[NCBI] 		1169205 Bacteria > Proteobacteria > Alphaproteobacteria > Rhizobiales > Brucellaceae > Brucella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CCP51197.1 [NCBI]
Genbank nucleotide accession
HF569091 [NCBI]
CDS location
range 19807 -> 20664
strand +
CDS
ATGCCAAGAGACAGCAACGGCAACACCAATCCACTGCTAGGGACTATCGTTCAAACCGGCGATACTATTCTGCCATCTCAGCACAACCCAGCGTTAGTTGATCTTTATGCAATGATGACGCAAAGCCTTAGCCGGGATGGGCAAGGTGGTATGCGCGCTAATCTTGCAATGAATGGGTTTCAGGTTACGGGATTAGGCAACGCTACCCAGCCGGGAAATGCAGTTCCATTGTCTCAGTTTCAGTCTGGTACTCCTGTGGGCGCAGTCATTGATTATGCTGGCGTTAACCCGCCTAATACGTGGCAATTTTGCTTTGGGCAAGCGATCGAAGTTTCAGCATATCCCGATTTCGTAGCAGCTTGCTATGTTGGTAATGCACTCAATGCCACGGCAGGATTTGGATATCGAACCACTTCACAGACTGATCCATCTAATAATAGGTCCACGTCTGGACAGTTTATTGTTTTGCCTGATTTGAGGGGCAGGGTAGGTGCTGGTAAGGATGACATGGGGGGTAGCGCTGCAAACCGTGTTACTACCACTGGAAGTGGGATTAATGGGGCTTTGATAGGTTCTAATGGTGGTGAGCAAAATAGTACACTAACAATAGATCAAATTCCCAATCATGACCACGGTGGCAGTACAGGAAATGGGGTTGGTAGCTATACAATACTAAATGTACTCAAGAACTTAACTGGTAATTTAAGTTTGAGTACAAATGGTCAAGTAGGTTTTACAAATGAAAATATACCATTTTCAACTCATAATCATCCTATAAGCCCACAAGGTGGAGGCTTGCCTCATAACAACATGCAGCCTACCGTAATAATCAACAAAATTATCAAGGTGTCTTACTAA

Tertiary structure

PDB ID
52bba87ca8aedba33a8e20b2de383ab781b19e601c669522f9e79e5077656a29
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7313
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete nucleotide sequence of different virulent Brucella phage genomes Hammerl,J.A. and Hertwig,S. 2014-08-28 — GenBank