Protein

View in Explore
Genbank accession
XYO02356.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,70
Protein sequence
MANLNKRLIDFAQAVSEKLLNVLNKIKELEQTIQTIRGIKGDKGDTGPQGPVGEQGPAGRDGIAGPSGSDGRNGYTFTPSLSSAGILSWTNDGNLANPSSINIKGPKGDIGPRGPIGPQGEQGPIGLRGPAGYEGEISDSYNGNRRNVPVSEYAVGLLHSKMEQLKETKQVWVGNVTQHSTNIIELSESILNKTLIFYMQYSQGHSLSNDNNVHTVSLYVDSSIMNVTGRKYCHGAFYAGGWKNCQIELVSENQIRIIDISSMYLKKITAV
Physico‐chemical
properties
protein length:271 AA
molecular weight: 29233,52830 Da
isoelectric point:7,74189
aromaticity:0,06273
hydropathy:-0,43653

Domains

Domains [InterPro]
Coil
Unmapped
12–32
Coil IPR050149
DC_1822
STR
21–102
DC_1822 G3DSA:1.20.5.320
IPR008160
STR
38–74
IPR008160 DC_0818
XYO02356.1
1 271
Architecture
STR
STR
RBD
STR 21-102 | STR 104-154 | RBD 155-271
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pasteurella phage Pmp14
[NCBI] 		3127677 Viruses >
Host Pasteurella multocida
[NCBI] 		747 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pasteurellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYO02356.1 [NCBI]
Genbank nucleotide accession
OR544131.1 [NCBI]
CDS location
range 7485 -> 8300
strand -
CDS
ATGGCTAATTTAAATAAAAGACTAATTGATTTTGCGCAAGCGGTGAGTGAAAAGTTGCTTAATGTGCTGAATAAAATCAAAGAACTTGAACAAACCATACAAACTATTAGAGGGATAAAAGGCGATAAAGGCGATACTGGACCTCAAGGACCAGTAGGAGAGCAAGGACCTGCTGGACGTGATGGTATTGCGGGTCCCTCTGGTTCAGATGGTCGTAATGGATATACATTTACACCGAGTTTATCTAGTGCAGGAATATTAAGCTGGACTAATGACGGTAACTTAGCCAATCCAAGCTCAATAAATATAAAAGGACCTAAAGGTGATATTGGACCTCGAGGACCCATTGGACCTCAAGGAGAGCAAGGACCAATAGGACTGCGTGGTCCTGCAGGTTATGAAGGAGAAATATCAGATTCATATAACGGTAATAGAAGAAATGTTCCAGTTAGTGAGTATGCTGTAGGACTTCTTCATTCCAAAATGGAGCAACTAAAAGAAACAAAACAAGTCTGGGTTGGCAACGTCACGCAACACTCGACAAACATCATCGAGTTATCCGAGTCTATTTTAAACAAGACGCTTATTTTTTATATGCAGTATTCACAAGGGCATTCGTTATCAAATGACAATAACGTCCACACAGTATCACTTTATGTAGACAGCTCGATAATGAATGTTACGGGGCGAAAATATTGCCATGGGGCTTTTTATGCCGGTGGTTGGAAAAACTGTCAAATTGAACTTGTGAGTGAAAATCAAATAAGAATTATTGACATATCTAGTATGTATTTGAAAAAAATCACAGCGGTCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
28f09fb970cd332df17d61d7adb6616322d3461c539c28ec4b73db8ad1498595
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7203
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50