Protein

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Genbank accession
QBX25521.1 [GenBank]
Protein name
capsid and scaffold protein
RBP type
TF
Evidence RBPdetect
Probability 0,83
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MTLVFSVAELGSSYSSSNNGSASGTWSNVSSLVNSSANLYGTFSPTKSYTIKGVLSDKFSRTEFAFDVGTESVVKSISKDGIGIQKIWEKGALDVKGDTYISGKLYVNNTEVKTSFDKTDILNMVYPVGAIYMSTSSANPSTFIGGTWQRYAQGRTIVGVSENESEFSYVGKTGGAKTHTLITSEMPSHTHGIGSGNKFVGNGTGEGGAGLSATSNSYAVYSNTASAGGGQPHNNLQPYITTYIWLRTA
Physico‐chemical
properties
protein length:249 AA
molecular weight: 26258,67340 Da
isoelectric point:7,84027
aromaticity:0,10442
hydropathy:-0,25984

Domains

Domains [InterPro]
IPR008577
1–141
IPR008577
SSF88874
122–243
SSF88874
QBX25521.1
1 249
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan262
[NCBI] 		2548079 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX25521.1 [NCBI]
Genbank nucleotide accession
MK448889 [NCBI]
CDS location
range 19663 -> 20412
strand +
CDS
ATGACACTCGTTTTTAGTGTTGCAGAATTAGGCTCTAGTTATTCTTCTTCCAATAATGGCTCAGCGAGTGGGACGTGGTCAAATGTGTCTAGCTTGGTAAACTCGTCCGCTAATTTATATGGTACCTTCTCGCCAACAAAGTCTTATACGATTAAAGGGGTGCTATCTGACAAGTTTAGTCGCACCGAATTTGCATTTGATGTTGGAACGGAATCAGTTGTCAAATCAATTTCCAAAGATGGGATTGGTATCCAAAAGATTTGGGAAAAGGGGGCTCTTGACGTTAAGGGGGACACTTATATTAGTGGCAAATTGTACGTCAACAATACAGAGGTTAAGACGTCATTTGACAAGACAGATATTTTAAACATGGTTTATCCTGTTGGGGCTATTTACATGAGCACATCATCTGCTAACCCATCGACATTTATTGGTGGCACATGGCAGAGATATGCTCAAGGTCGGACCATTGTCGGGGTCTCCGAAAATGAGAGTGAATTTAGTTACGTTGGTAAAACTGGAGGAGCCAAAACTCATACTTTAATAACTAGCGAAATGCCTAGTCATACGCACGGAATAGGTAGTGGAAACAAATTCGTTGGGAATGGTACTGGAGAAGGAGGAGCTGGATTAAGCGCAACGTCCAATTCTTATGCTGTTTATAGCAATACCGCATCTGCTGGTGGAGGTCAACCTCACAACAATTTACAACCGTACATCACAACATATATTTGGCTCAGAACAGCCTAG

Tertiary structure

PDB ID
af208fac14f65bd7c81fa29321373f733308827fae81eaeb19f001d0512f7b28
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7668
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank