Protein

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Genbank accession
YP_010762381.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MPNIMKPTGINSIWSENGQKVDPGAVKVGLGWVTELPPYQTANFIEYKQDLFNAHVNQHGIPEWDSVTEYQGNLSYTQGANGVIYKCLRTHSDKIPTDPLNITAGYWRVAFEDAGEAAKVQANLDKHVTNYNTLSGIGNVVIARQNLSVYSKAEGDARYAMKHGNGSNVFSVATATQPTHAIPLSQLATLVPPATETVSGVMSIATTIETEAGTNDAKAVSPLKAAQVYLKKKDNLSGLSNVTAARANLGLSDTATMPSATFLKAANNLSDVPNKALARSNLGITSSATQPETYFLRSAQNLADVPNKAQARINLGLTGMATTDPAAVVMKADNLAGLADPATARSNLGLGTASTKDVGDFLSSGANLSDLTNVQAARNNLGLKGAATLDVWGLPANTTAMDFQSSQADISRGWARLPNGLLLQWGTGPGLSDDTRTNIQLPVPARILNVQVTVMGTFNNSIGPGAFMTDMWSNTGFRVSCNWGNWSYPFNWFAITSTL
Physico‐chemical
properties
protein length:499 AA
molecular weight: 52967,87120 Da
isoelectric point:6,60346
aromaticity:0,07214
hydropathy:-0,18838

Domains

Domains [InterPro]
DC_0043
STR
1–320
DC_0043 DC_0362
G3DSA:2.60.40.3940
RBD
407–495
G3DSA:2.60.40.3940
IPR054075
RBD
416–495
IPR054075
YP_010762381.1
1 499
Architecture
STR
RBD
STR 1-320 | RBD 322-499
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage ITTPL
[NCBI] 		2544984 Uroviricota > Caudoviricetes > Vandenendeviridae > Pakpunavirus > Pakpunavirus ITTPL
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010762381.1 [NCBI]
Genbank nucleotide accession
NC_073605.1 [NCBI]
CDS location
range 47604 -> 49103
strand +
CDS
ATGCCAAACATTATGAAGCCTACGGGAATCAACTCTATCTGGTCTGAAAACGGCCAGAAGGTTGACCCGGGCGCTGTGAAAGTTGGACTGGGCTGGGTTACGGAACTTCCTCCGTACCAGACTGCCAACTTTATCGAGTACAAACAAGACCTGTTTAACGCTCACGTTAACCAACATGGTATTCCAGAGTGGGACAGCGTTACAGAGTATCAGGGCAATCTGAGCTATACTCAGGGCGCTAACGGAGTTATCTATAAGTGCCTTAGGACTCACTCTGATAAGATTCCAACTGACCCTCTGAACATTACAGCCGGATATTGGAGAGTGGCGTTTGAGGATGCAGGGGAAGCGGCCAAGGTTCAAGCCAACCTAGACAAACACGTAACCAACTACAACACCCTCTCTGGGATTGGCAACGTAGTTATTGCAAGACAAAACCTAAGTGTGTATAGTAAAGCTGAAGGCGATGCCCGGTACGCTATGAAGCACGGGAACGGCTCTAATGTCTTCAGCGTTGCCACTGCCACACAGCCAACTCACGCTATTCCTTTGAGCCAATTGGCCACTCTCGTCCCTCCGGCTACAGAGACCGTTAGTGGCGTCATGTCGATTGCAACGACAATCGAGACAGAGGCCGGCACTAATGACGCTAAAGCTGTCAGCCCTCTGAAAGCCGCTCAGGTGTATCTGAAAAAGAAAGATAACCTATCCGGGCTGTCTAACGTAACTGCGGCTAGAGCTAACCTAGGCCTATCTGACACCGCTACAATGCCTTCGGCTACGTTCCTGAAGGCTGCCAATAACCTGTCTGATGTTCCTAACAAGGCATTGGCTAGGTCTAACCTTGGTATCACAAGCAGTGCCACTCAACCAGAAACCTACTTCCTGAGAAGTGCTCAGAACCTTGCAGATGTTCCTAACAAAGCCCAAGCAAGGATCAACCTAGGGTTGACGGGGATGGCTACAACAGACCCTGCGGCTGTTGTCATGAAGGCTGATAACCTTGCGGGATTGGCTGACCCAGCTACGGCACGGTCTAATCTGGGGCTGGGGACGGCATCTACCAAGGACGTGGGAGATTTCCTATCGTCTGGAGCCAACCTTTCCGACTTGACCAACGTTCAAGCCGCTAGAAACAACCTAGGCCTAAAGGGTGCTGCCACTCTAGATGTTTGGGGGCTTCCAGCTAACACCACAGCAATGGATTTCCAATCTAGTCAGGCCGATATCTCCAGAGGATGGGCTAGACTTCCTAACGGTCTCCTGCTACAGTGGGGAACTGGGCCGGGGCTGTCTGACGATACGAGAACGAATATCCAGCTTCCAGTTCCTGCCCGCATCTTGAACGTGCAAGTGACTGTAATGGGGACGTTTAACAACTCCATCGGCCCGGGCGCTTTCATGACGGATATGTGGAGTAACACGGGGTTCAGAGTTAGCTGCAACTGGGGTAACTGGTCTTATCCGTTCAACTGGTTTGCTATCACTTCAACCCTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
39a21cf57ec574e4fe1c96121dbc2c84ccb902cb983f2ab06cc1cba6b8b0bf39
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7552
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization of Pseudomonas aeruginosa lytic bacteriophage IttPL Alvi,I.A., Asif,M., Tabassum,R., Abbas,Z. and Rehman,S.U. 2023-09-25 — GenBank