Protein

View in Explore
Genbank accession
YP_010762381.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MPNIMKPTGINSIWSENGQKVDPGAVKVGLGWVTELPPYQTANFIEYKQDLFNAHVNQHGIPEWDSVTEYQGNLSYTQGANGVIYKCLRTHSDKIPTDPLNITAGYWRVAFEDAGEAAKVQANLDKHVTNYNTLSGIGNVVIARQNLSVYSKAEGDARYAMKHGNGSNVFSVATATQPTHAIPLSQLATLVPPATETVSGVMSIATTIETEAGTNDAKAVSPLKAAQVYLKKKDNLSGLSNVTAARANLGLSDTATMPSATFLKAANNLSDVPNKALARSNLGITSSATQPETYFLRSAQNLADVPNKAQARINLGLTGMATTDPAAVVMKADNLAGLADPATARSNLGLGTASTKDVGDFLSSGANLSDLTNVQAARNNLGLKGAATLDVWGLPANTTAMDFQSSQADISRGWARLPNGLLLQWGTGPGLSDDTRTNIQLPVPARILNVQVTVMGTFNNSIGPGAFMTDMWSNTGFRVSCNWGNWSYPFNWFAITSTL
Physico‐chemical
properties
protein length:499 AA
molecular weight: 52967,87120 Da
isoelectric point:6,60346
aromaticity:0,07214
hydropathy:-0,18838

Domains

Domains [InterPro]
G3DSA:2.60.40.3940
407–495
G3DSA:2.60.40.3940
IPR054075
416–495
IPR054075
YP_010762381.1
1 499
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage ITTPL
[NCBI] 		2544984 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010762381.1 [NCBI]
Genbank nucleotide accession
NC_073605 [NCBI]
CDS location
range 47604 -> 49103
strand +
CDS
ATGCCAAACATTATGAAGCCTACGGGAATCAACTCTATCTGGTCTGAAAACGGCCAGAAGGTTGACCCGGGCGCTGTGAAAGTTGGACTGGGCTGGGTTACGGAACTTCCTCCGTACCAGACTGCCAACTTTATCGAGTACAAACAAGACCTGTTTAACGCTCACGTTAACCAACATGGTATTCCAGAGTGGGACAGCGTTACAGAGTATCAGGGCAATCTGAGCTATACTCAGGGCGCTAACGGAGTTATCTATAAGTGCCTTAGGACTCACTCTGATAAGATTCCAACTGACCCTCTGAACATTACAGCCGGATATTGGAGAGTGGCGTTTGAGGATGCAGGGGAAGCGGCCAAGGTTCAAGCCAACCTAGACAAACACGTAACCAACTACAACACCCTCTCTGGGATTGGCAACGTAGTTATTGCAAGACAAAACCTAAGTGTGTATAGTAAAGCTGAAGGCGATGCCCGGTACGCTATGAAGCACGGGAACGGCTCTAATGTCTTCAGCGTTGCCACTGCCACACAGCCAACTCACGCTATTCCTTTGAGCCAATTGGCCACTCTCGTCCCTCCGGCTACAGAGACCGTTAGTGGCGTCATGTCGATTGCAACGACAATCGAGACAGAGGCCGGCACTAATGACGCTAAAGCTGTCAGCCCTCTGAAAGCCGCTCAGGTGTATCTGAAAAAGAAAGATAACCTATCCGGGCTGTCTAACGTAACTGCGGCTAGAGCTAACCTAGGCCTATCTGACACCGCTACAATGCCTTCGGCTACGTTCCTGAAGGCTGCCAATAACCTGTCTGATGTTCCTAACAAGGCATTGGCTAGGTCTAACCTTGGTATCACAAGCAGTGCCACTCAACCAGAAACCTACTTCCTGAGAAGTGCTCAGAACCTTGCAGATGTTCCTAACAAAGCCCAAGCAAGGATCAACCTAGGGTTGACGGGGATGGCTACAACAGACCCTGCGGCTGTTGTCATGAAGGCTGATAACCTTGCGGGATTGGCTGACCCAGCTACGGCACGGTCTAATCTGGGGCTGGGGACGGCATCTACCAAGGACGTGGGAGATTTCCTATCGTCTGGAGCCAACCTTTCCGACTTGACCAACGTTCAAGCCGCTAGAAACAACCTAGGCCTAAAGGGTGCTGCCACTCTAGATGTTTGGGGGCTTCCAGCTAACACCACAGCAATGGATTTCCAATCTAGTCAGGCCGATATCTCCAGAGGATGGGCTAGACTTCCTAACGGTCTCCTGCTACAGTGGGGAACTGGGCCGGGGCTGTCTGACGATACGAGAACGAATATCCAGCTTCCAGTTCCTGCCCGCATCTTGAACGTGCAAGTGACTGTAATGGGGACGTTTAACAACTCCATCGGCCCGGGCGCTTTCATGACGGATATGTGGAGTAACACGGGGTTCAGAGTTAGCTGCAACTGGGGTAACTGGTCTTATCCGTTCAACTGGTTTGCTATCACTTCAACCCTGTAA

Tertiary structure

PDB ID
39a21cf57ec574e4fe1c96121dbc2c84ccb902cb983f2ab06cc1cba6b8b0bf39
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7552
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization of Pseudomonas aeruginosa lytic bacteriophage IttPL Alvi,I.A., Asif,M., Tabassum,R., Abbas,Z. and Rehman,S.U. 2023-09-25 — GenBank