Protein

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UniProt accession
Q0QZJ4 [UniProt]
Protein name
Structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TSP
Evidence RBPdetect2
Probability 0,83
Protein sequence
MALTRLKNIITSRTGRIIYVNPDDFDASDAIDNRGNSALRPFKTIQRAFLEVARFSYRVGLSNDEFDAFSIMLYPAEYIIDNRPGDVLYTNVAPIDENSNLDLTSPNNVLYKFNSVEGGVIVPRGCSLVGTDLRRTKIIPKYVPYPTILPSKNINTEEQSPSRTAIFKVTGGTYFWQFSFFDGAEEGVYFKPDSTETLAPKYSHHKLTCFEFADGRNTLSDLITGGTVPNADYSAVPNILERTDLEIYYQKVSKAFATIPDTSGDPTQDQIQARVEENRIVGPISDEYRVLQITRNGQTATAVTVDEFDNPRDHGFSVGVNINVSGVTGSTGPQSDIDATLYNGSFTVTSASGNVFTYQMQGEPTGNAVGSNISVKTEIDTVDSASPYAFNLSLRSVWGMNGMNADGSKATGFKSMVVAQFTGLSLQKDDRAFVRYNESTGNYDVATAGDGAHLDGFAEYRRGWGHRHIVCSNDAFIQSVSVFAVGYDTHFTAESGGDMSITNSNSNFGNTALRSAGFKAQAFSKDKAGEITHIVPPKALQVISTTATGTSGESSITLVNDGSIEGVIEGTVVSGDGIGSGATVGSVNRSTRVVTLTQPNTATVNGNVIFGEEVSINWVNIDIQRTKVINSALAGQGGTAGTRLYLYGYTTQASPPTTRVQGFTVGARQDGEGANAVADTINCLLVAAGANSASVQQASIAPYGPSVSGVAAGQVGSPIQYDENTYTISGSTQVGGWYLSVSATDNEIYTTLNTNNQYNNVNFTPTTFLKRIPDSRDLQDRTYRVRMVIDKDKTNPLPRNPISGYVMQPLNSDTTNYNLNRAFYIYDIEVVQEFERGVKDGIFYLTLLCASIAPSTSNFNNRKFSQNVNEVYPTFDRDNPIADPNAAVSVADNQTIGLVNSTDGATPTPNLDPKRSITKESIQFLLTDTGWTQPGTTPNYDSINERLSSINLTARAGDEETRKINIRENNDGTVAPIPIELRRHSILRSGNHTFEYLGFGPGNYSTAFPQTQVETLTQNQVRFSQSIKEEAGVAFYSGLNSNGDLFIGNQVINPVTGQITNEDIAQLNVIGEENTTIETFSELVLTDKLTVIGGASNQLESIFAGPVTFQGQTTFTSNLSAKKITYFNQDGTVIKQSLLAPEDANGLPDFSNITGYDTPADGDLVYNINWTPGKSLGWIYSGQTWYEFGLTDTGFINIDPNNGSPIIGIGTAANSNFRVNVDGNVRIDGNVSGTGRGLVGSDKYITKSYTGDGATLTFAVTTYVAPYQHTDDSLLVFLNGVAQIAGTNYTVDSLGANVVFTDAPQSTDTVHILELPI
Physico‐chemical
properties
protein length:1317 AA
molecular weight: 142179,28960 Da
isoelectric point:4,70447
aromaticity:0,09188
hydropathy:-0,28998

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage syn9
[NCBI] 		382359 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus
[NCBI] 		1129 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales >
Host Synechococcus sp. WH 8012
[NCBI] 		166313 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Tertiary structure

PDB ID
93d35d09d5f04472cb6a0a0db3594a822e648ba0b60a81e86960e95f3a46e3ad
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3775
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and structural analysis of Syn9, a cyanophage infecting marine Prochlorococcus and Synechococcus. Weigele PR, Pope WH, Pedulla ML, Houtz JM, Smith AL, Conway JF, King J, Hatfull GF, Lawrence JG, Hendrix RW 2007-07 17564603 PubMed
Genomic and structural analysis of Syn9, a cyanophage infecting marine <i>Prochlorococcus</i> and <i>Synechococcus</i> Peter R. Weigele, Welkin H. Pope, Marisa L. Pedulla, Jennifer M. Houtz, Alexis L. Smith, James F. Conway, Jonathan King, Graham F. Hatfull, Jeffrey G. Lawrence, Roger W. Hendrix 2007-03-23 10.1111/j.1462-2920.2007.01285.x DOI