Protein

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Genbank accession
AAR89341.2 [GenBank]
Protein name
gp48
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,75
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MKKNKHVLFGVLLTACGLPAFAQFAPGQVLTAAQLNSQFALYVPLAGGTLTGPLTVPTLTVTTALNTAHANITGGTISGLSTPISVPSGGLGAASLSGYLYGNGTSAVTAAATIPCIPASTNATCTVSTNAALQALSVAAFPVNSIIYRAGYATAGDGGAMFYRPSNAACSLAAGNGDNGSQVKSADGNCFLWQPAGQRVTPMVFGATGNGTADDTTPLQNALTATAGHTLYLGNNLYGISSTLTANGNIEGNGGGQGIYNATCTSGIRLLAGTFDAMSLGRAGIAIRNICMDIAGGVTSTKGGIVEIGAHNFLVVEKSQFNNVCKGIYLSGNGGTQNVGSRIVDNTIIPYNTAGCAAIVVGNVSTGASTVDAVLRGNQIYCGGAPNADGIQVYDAGGLMASQNTPYMCKYGTRIIPGTNQQTIWAYFNSTVLGDTSGTNDLLIDPSASSAVIHGLNFTDTWASSATGGDNVRIQDTGAVPVASYQGIRFVNHRTYIATTSSNGFTINATAEVAIKDSTICAAAANTGSGISLGATMQKVAIQNNTIGTCDQTSGSLATGITVPSGVDKLMITGNRLDTATAPLSLADSAAAAWVIRDNLGVDNITGNIASAASIVLPNNPIVNVTGTTAVTGMTARWSHRTLTLVPSTAGGVAFNTGGSTGPMCNSVTAAQFVSVSATWDSGFGCWLLK
Physico‐chemical
properties
protein length:690 AA
molecular weight: 69469,28280 Da
isoelectric point:6,62927
aromaticity:0,06232
hydropathy:0,21928

Domains

Domains [InterPro]
PS51257
STR
1–16
PS51257 IPR011050 DC_2234
DC_1616
RBD
1–225
DC_1616
IPR012334
STR
203–424
IPR012334
AAR89341.2
1 690
Architecture
STR
RBD
STR
RBD
STR 1-16 | RBD 17-189 | STR 190-433 | RBD 439-690
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AAR89341.2
1 690
Domain Start End Length (AA) Confidence
N-terminal 1 212 212 0,9316
Central domain 213 604 393 0,9949
C-terminal 605 690 85 0,9827
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-212
Central
213-604
C-terminal
605-690

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage Bcep43
[NCBI] 		2883945 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Burkholderia cepacia
[NCBI] 		292 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAR89341.2 [NCBI]
Genbank nucleotide accession
AY368235 [NCBI]
CDS location
range 33321 -> 35394
strand -
CDS
ATGAAAAAAAACAAACACGTACTATTCGGTGTGCTGCTCACAGCATGTGGACTGCCTGCATTTGCGCAGTTCGCACCGGGCCAAGTTCTGACCGCCGCACAGCTCAACAGCCAATTCGCACTTTACGTGCCGCTCGCAGGCGGCACGCTCACCGGCCCGTTGACGGTGCCGACGTTGACGGTCACGACCGCACTAAACACTGCGCACGCCAACATCACAGGCGGCACAATCTCAGGTTTGTCGACACCAATCTCGGTGCCGTCAGGCGGCTTGGGGGCGGCTTCACTGTCGGGCTATCTCTATGGAAATGGCACGAGTGCAGTAACGGCGGCGGCCACCATTCCTTGTATCCCCGCGTCTACGAACGCCACCTGCACAGTTTCGACCAATGCCGCACTGCAGGCGCTGTCAGTTGCGGCATTTCCGGTCAATAGCATCATCTATCGCGCAGGTTATGCAACTGCCGGCGATGGCGGTGCGATGTTTTACCGGCCTTCAAACGCGGCATGCTCATTGGCTGCCGGTAATGGCGATAATGGTTCGCAGGTGAAATCTGCAGATGGCAATTGTTTTTTGTGGCAACCCGCAGGACAGCGCGTCACGCCGATGGTGTTCGGCGCGACCGGCAATGGTACGGCAGATGATACGACACCTCTGCAAAACGCACTCACGGCAACGGCCGGACACACGCTATATCTCGGAAATAACCTATATGGCATTTCGTCGACGTTGACGGCCAACGGCAACATCGAAGGCAACGGCGGGGGACAGGGCATCTATAACGCCACGTGCACGTCAGGGATTCGACTGCTGGCGGGCACCTTCGATGCTATGAGTCTGGGTCGAGCAGGTATCGCAATTCGAAACATCTGCATGGATATCGCGGGCGGCGTCACGTCAACTAAGGGCGGCATCGTCGAGATTGGCGCACACAATTTTCTCGTGGTTGAGAAGTCACAATTCAACAATGTGTGCAAAGGCATTTACCTGAGCGGAAACGGCGGCACACAAAATGTCGGTTCGCGCATTGTCGATAACACGATTATTCCTTACAACACGGCAGGATGCGCGGCGATTGTGGTCGGCAACGTTTCTACCGGGGCCAGCACGGTTGACGCGGTATTGCGCGGTAACCAGATTTATTGTGGCGGCGCGCCAAACGCGGATGGTATTCAGGTCTATGATGCGGGCGGCCTCATGGCTTCGCAAAATACGCCCTATATGTGCAAATATGGCACGCGGATCATTCCAGGCACGAACCAGCAAACTATCTGGGCATATTTCAATTCGACCGTACTGGGCGACACATCAGGAACAAATGACCTGTTGATCGACCCATCCGCATCGTCAGCCGTTATTCATGGGCTCAATTTCACGGACACATGGGCGTCAAGTGCGACCGGCGGCGACAATGTGCGAATTCAAGATACGGGCGCAGTACCAGTCGCATCGTACCAGGGCATCCGATTCGTTAATCACAGGACGTACATTGCAACGACGAGCAGTAACGGTTTCACGATCAATGCGACGGCCGAAGTGGCAATCAAGGATTCGACAATCTGCGCGGCTGCGGCGAACACGGGGAGTGGTATTTCGTTAGGCGCGACTATGCAAAAAGTCGCGATCCAAAACAACACAATCGGCACGTGCGACCAGACAAGCGGGTCACTCGCGACGGGCATCACGGTGCCGTCTGGCGTAGACAAGCTGATGATAACCGGCAATCGATTGGACACGGCAACCGCACCGCTGTCGCTGGCCGACTCGGCTGCAGCAGCGTGGGTTATTCGAGACAATCTCGGCGTCGATAACATCACGGGTAATATCGCGTCCGCAGCATCGATCGTTCTGCCGAATAACCCAATCGTGAACGTGACGGGCACGACTGCCGTAACCGGTATGACCGCTCGTTGGAGTCACAGGACGTTGACGCTTGTACCATCTACCGCAGGGGGCGTCGCATTCAATACAGGGGGCAGTACCGGACCCATGTGCAATAGCGTTACGGCTGCGCAGTTTGTGAGCGTATCTGCGACATGGGACAGCGGCTTCGGCTGCTGGTTGTTGAAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
2967bcf8110f5ad96739c9539c6e4503dc231676cd72e04102b85d3e8018a7a7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8331
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50