Protein

View in Explore
Genbank accession
UVD31726.1 [GenBank]
Protein name
long-tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MANTYFNYMDPVEPGDRLESTKYNGDFSAIARAFDILPSPDALASNTGNYARSQGTSTAYTVTLPRFDGRFGYITGMQVLLNIHVNNTGEATLNINGLGPKPLVNLTTALGPLVANDLRAGTIYSIRYDGTRFQVVNTVSGAVNASQTAATQATTAATNAGTSATNAANSASAAATSASNAASSASAAASGVTTAANSASAASTSATNAANSASAANTSAGNAASSATAASGSATSAAGSATAAAGSASTANTRATAAANSATAAANSATAAAASAQTALNAIGDASFKAAVMGVLLTSTLDVGVVKFYALNINLNTKYPGTTWVRLPVSQSIRTSNATASDVMTTVGSDTVTLVTANLPSHNHTGTATIANTDLGNKTSTSFDYGTKTSSSKDYGNLTSSSFDYGDLTSSSYDYANATSSAAGSHSHTVPAINGTGTTAKLKSAANDSSSAGNVATSSVGNHTHTFDLPSHNHTVGIGAHTHTVSLGTHSHTVDVGSHTHTVAVGSHNHTVTASIGNTGIDQAFSIVAKSTILVGWRRTA
Physico‐chemical
properties
protein length:541 AA
molecular weight: 53810,71500 Da
isoelectric point:6,99719
aromaticity:0,05360
hydropathy:-0,08115

Domains

Domains [InterPro]
DC_2096
ATT
24–216
DC_2096 DC_0698 DC_0348
IPR051934
Unmapped
147–278
IPR051934
UVD31726.1
1 541
Architecture
ATT
STR
RBD
ATT 24-216 | STR 245-460 | RBD 461-541
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Pondi
[NCBI] 		2972476 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UVD31726.1 [NCBI]
Genbank nucleotide accession
OP136151.1 [NCBI]
CDS location
range 56895 -> 58520
strand -
CDS
ATGGCTAACACTTATTTCAACTACATGGACCCGGTGGAACCGGGCGACCGTCTGGAGTCAACAAAATACAACGGCGACTTCTCCGCGATTGCCCGTGCTTTCGACATCCTGCCGTCGCCAGATGCACTGGCCTCCAACACCGGAAACTATGCCCGTTCGCAGGGTACATCTACGGCGTACACCGTAACTCTACCGCGCTTCGACGGCAGGTTCGGTTATATCACGGGTATGCAGGTGTTGCTCAATATTCACGTTAATAACACCGGGGAGGCCACGCTCAACATTAACGGACTCGGCCCTAAGCCGCTCGTCAACCTGACTACAGCGCTCGGTCCACTGGTGGCTAACGATCTGCGTGCAGGCACCATCTATTCCATCCGTTATGACGGTACCCGTTTCCAGGTAGTCAACACTGTTTCCGGTGCGGTAAACGCATCGCAGACCGCAGCTACCCAAGCGACTACCGCCGCCACAAACGCTGGCACATCCGCCACCAACGCAGCCAATAGCGCCAGCGCCGCAGCGACAAGCGCGAGTAATGCAGCCAGCAGCGCCAGCGCCGCAGCTTCGGGTGTGACAACCGCAGCAAACTCTGCCAGCGCCGCATCGACGTCTGCAACCAATGCAGCAAACTCTGCGTCTGCGGCAAACACATCTGCGGGTAACGCCGCCAGCAGCGCCACGGCAGCGTCCGGCAGCGCCACGTCAGCAGCAGGTAGCGCCACGGCAGCGGCAGGTAGCGCCAGTACGGCTAACACTCGTGCCACGGCAGCGGCAAACTCAGCAACGGCAGCGGCAAACTCAGCAACGGCAGCGGCGGCCAGCGCTCAGACTGCGCTCAACGCTATCGGTGACGCGTCGTTTAAGGCGGCGGTAATGGGTGTCCTGTTAACCAGTACGCTGGACGTGGGTGTCGTCAAATTCTATGCGCTGAACATTAACCTTAACACCAAATACCCCGGCACCACCTGGGTACGTCTCCCGGTATCGCAAAGCATCCGCACATCCAACGCCACAGCAAGCGACGTCATGACCACGGTAGGCTCTGACACTGTGACACTGGTAACAGCCAACCTACCATCGCACAACCATACTGGTACCGCGACAATTGCCAATACGGATTTAGGTAACAAGACGTCAACCAGCTTTGACTACGGTACCAAAACATCCAGCAGCAAAGACTACGGTAACCTGACATCATCCAGCTTTGACTACGGTGACCTTACGTCATCCAGCTATGATTACGCCAACGCCACATCAAGTGCCGCAGGCAGTCACAGTCATACCGTACCCGCTATTAACGGTACCGGTACTACGGCAAAACTTAAATCAGCAGCAAACGACTCATCGTCTGCGGGTAACGTCGCCACATCCAGCGTTGGTAACCACACGCATACGTTCGACCTACCGTCACACAACCACACTGTTGGTATCGGTGCACATACACACACTGTGTCGCTGGGTACACACAGTCACACGGTAGATGTGGGAAGCCACACTCACACGGTAGCGGTGGGAAGTCACAACCATACAGTGACAGCCAGCATCGGTAACACGGGTATTGATCAGGCTTTCAGCATCGTGGCAAAATCTACTATCCTCGTCGGCTGGAGACGTACAGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
3b6d31bf2a135820f2ec4365610d777933537004bb6a3095d4b689cf2036e5a9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6744
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A flexible and efficient microfluidics platform for the isolation of novel bacteriophages Sidi Mabrouk,A., Ongenae,V., Claessen,D., Brenzinger,S. and Briegel,A. 2023-01-31 — GenBank