Protein

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Genbank accession
CAB4131029.1 [GenBank]
Protein name
Pectate lyase superfamily protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTSTVFSSGTVITAPWLNDVNTKTYADTSNTVAYTPAGTGAVATTVQTKERQIISVFDFFTAAQIADVNSCTASIDTRDAINAAIEYAYTFVVTQTVFDEYGWQSRGGATIYFPPGKYLTSSGPIQIRPNVSLKGNGKSSSVIYSTYNGIICEVKQASKSGEYNQAGITIQDLMVIGNRATTSTQTAFDLQRPVGMKMIGVVINSCSSDGMILREVSNSTFIDVEIANCGGCGLRIMQGSTGLPSNANTFISPRILYNDGDGLILQEQVNGNTFIGGSIERNGYATTGVGFYNVKITSNSYQPNHFIDLWTEGPCDAHVLMNSSSGTGAITRFTGWKHFGDGTTASPNRALINTSGYAIITQPTASSVSYKIINSSNSPFRVNKAGGAAIIYLEDPYGATITSPINWIEDENGNHTGLYGIAYLRDSSSTLGPQTFYNDNGAANGVAYKNDTKTYPWYQSRSFYTDLLLGTGDATPSAGISAGNGSPQGSKTASPGSIYMNMSGGAGTSFYVKESGTGNTGWVAK
Physico‐chemical
properties
protein length:525 AA
molecular weight: 55678,09310 Da
isoelectric point:5,48607
aromaticity:0,10095
hydropathy:-0,19448

Domains

Domains [InterPro]
DC_1709
STR
2–523
DC_1709
IPR012334
STR
16–444
IPR012334
IPR011050
STR
63–322
IPR011050
IPR024535
ENZ
75–236
IPR024535
CAB4131029.1
1 525
Architecture
STR
STR 2-523 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAB4131029.1
1 525
Domain Start End Length (AA) Confidence
N-terminal 1 72 72 0,9688
Central domain 73 389 318 0,9857
C-terminal 390 525 135 0,8142
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-72
Central
73-389
C-terminal
390-525

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Uroviricota > Caudoviricetes > Peduoviridae > Maltschvirus maltsch >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4131029.1 [NCBI]
Genbank nucleotide accession
LR796246 [NCBI]
CDS location
range 23564 -> 25141
strand +
CDS
ATGACCTCAACTGTATTTAGTAGCGGGACGGTCATTACGGCCCCTTGGCTTAACGATGTAAACACTAAGACGTATGCTGACACTAGTAACACTGTAGCGTACACACCCGCTGGCACTGGCGCTGTGGCAACCACGGTGCAGACAAAAGAACGTCAAATCATAAGTGTTTTTGATTTTTTTACGGCGGCACAAATTGCGGATGTCAACTCATGCACTGCGTCAATTGACACCCGAGATGCTATCAATGCCGCTATTGAATACGCTTACACATTTGTTGTAACTCAAACTGTATTTGATGAATATGGTTGGCAGTCTCGTGGTGGCGCAACAATTTATTTTCCACCCGGTAAATACTTAACCTCGTCCGGCCCTATTCAAATCCGACCAAACGTGTCGTTGAAAGGCAACGGCAAATCATCTAGCGTTATTTACAGCACTTATAATGGCATTATTTGCGAAGTAAAACAAGCAAGTAAGTCTGGTGAATATAACCAAGCTGGAATCACTATTCAAGATTTAATGGTGATTGGTAATCGCGCAACTACTTCTACTCAAACAGCTTTTGATTTACAGCGGCCTGTTGGTATGAAGATGATTGGCGTTGTCATCAATTCTTGTTCATCTGATGGCATGATTTTACGTGAAGTGTCAAACAGCACATTTATCGACGTTGAAATTGCTAACTGTGGTGGTTGTGGGCTACGTATCATGCAGGGGTCAACTGGCCTACCGTCAAATGCCAATACGTTTATTAGCCCCCGTATTTTGTACAACGATGGGGATGGTTTGATTTTGCAAGAGCAAGTCAACGGCAATACGTTTATTGGTGGCTCTATTGAGCGCAACGGATATGCTACAACGGGCGTTGGGTTTTACAACGTAAAAATAACCTCTAACAGTTATCAGCCAAACCATTTTATCGATCTTTGGACTGAAGGCCCATGCGATGCCCACGTTTTAATGAATAGTTCATCGGGCACAGGTGCAATTACCCGATTTACGGGCTGGAAACATTTTGGCGATGGTACAACCGCAAGTCCAAACAGAGCTTTAATTAACACAAGCGGTTACGCAATTATTACGCAGCCAACGGCATCCTCAGTTTCGTACAAAATAATCAATAGTTCTAATTCGCCATTTCGCGTAAACAAAGCTGGCGGCGCAGCTATTATTTATTTGGAAGACCCATATGGCGCAACAATTACATCTCCAATCAATTGGATTGAAGATGAGAACGGAAACCACACTGGTCTGTATGGGATAGCATATCTTAGAGATTCAAGCTCTACATTAGGGCCGCAAACTTTTTACAATGACAACGGCGCGGCTAACGGCGTAGCGTATAAAAACGATACCAAGACTTATCCTTGGTATCAATCAAGATCGTTTTACACAGATTTGTTATTGGGTACTGGCGATGCAACACCTTCTGCTGGAATTTCGGCTGGTAATGGAAGTCCTCAAGGAAGCAAAACCGCAAGTCCAGGTTCTATTTATATGAATATGTCTGGTGGCGCAGGAACATCTTTTTACGTCAAAGAATCTGGGACTGGTAATACAGGATGGGTAGCCAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
cc00a78cc28b66fc698a388bf9b3d0f993093b26915c013757aa1d41f6f7c678
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7284
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50