Protein

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Genbank accession
YP_010071908.1 [GenBank]
Protein name
tail collar fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MSNNTYQHVSNESRYVKFDPTGTNFPEEITDVQAAIAAISPAGVNGVPDASSTTKGILFLATEQEVIDGTNNTKAVTPATLATRLSYPNATEEVYGLTRYSTDDEAVAGVNNESSITPAKFTTAINHIFDTRISSESSLGVIKLSSLPQALAGADDTTAMTPLKTQQLAIKLIAQIAPSETTATESDQGVVQLATVAQVRQGTLREGYAISPYTLMNSTATEEYKGVIKLGTQSEVNSNNASVAVTGATLNGRGSTTSMRGVVKLTTTAGSQSGGDASSALAWNADVIHQRGGQTINGTLRINNTLTIASGGANITGTVNMTGGYIQGKRVVTQNEIDRTIPVGAIMMWAADSLPSDAWRFCHGGTVSASDCPLYASRIGTRYGGSSSNPGLPDMRGLFVRGSGRGSHLTNPNVNGNDQFGKPRLGVGCTGGYVGEVQKQQMSYHKHAGGFGEHDDSGAFGNTRRSNFVGTRKGLDWDNRSYFTNDGYEIDPASQRNSKYTLNRPELIGNETRPWNISLNYIIKVKE
Physico‐chemical
properties
protein length:527 AA
molecular weight: 55906,23940 Da
isoelectric point:6,28050
aromaticity:0,06452
hydropathy:-0,39412

Domains

Domains [InterPro]
DC_0176
STR
1–447
DC_0176
IPR015173
STR
246–326
IPR015173 IPR037053 IPR044916
SSF69349
STR
246–326
SSF69349 SSF88874
G3DSA:2.10.280.10
Unmapped
246–286
G3DSA:2.10.280.10 G3DSA:2.160.30.10 IPR011083 IPR027448
YP_010071908.1
1 527
Architecture
STR
ATT
STR
STR 1-329 | ATT 330-400 | STR 401-525 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_Lutter
[NCBI] 		2750850 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Tequatrovirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010071908.1 [NCBI]
Genbank nucleotide accession
NC_054924 [NCBI]
CDS location
range 91132 -> 92715
strand +
CDS
ATGAGTAATAATACATATCAACACGTTTCTAATGAATCTCGTTATGTAAAATTTGATCCAACTGGTACAAATTTTCCGGAAGAGATTACTGATGTTCAGGCTGCTATAGCAGCCATTTCTCCTGCTGGCGTAAATGGAGTTCCTGATGCATCGTCAACAACAAAGGGAATTTTATTTCTTGCCACTGAACAGGAAGTTATAGATGGAACTAATAATACCAAAGCAGTTACACCGGCAACGTTGGCAACAAGATTATCATATCCAAATGCTACCGAAGAAGTTTATGGACTTACACGTTATTCAACAGACGATGAAGCTGTAGCTGGTGTTAATAATGAATCATCTATAACTCCGGCTAAATTTACTACAGCAATTAATCACATTTTTGATACACGAATTTCTTCTGAAAGTTCACTTGGCGTTATTAAGTTATCATCTCTACCGCAAGCATTAGCTGGTGCAGATGATACTACTGCAATGACTCCATTAAAAACGCAGCAGTTAGCTATTAAATTAATTGCGCAAATTGCTCCTTCTGAAACTACAGCTACAGAGTCTGACCAGGGTGTTGTTCAATTAGCAACAGTAGCACAGGTTCGTCAGGGAACTTTGAGAGAAGGCTATGCAATTTCTCCTTATACGCTAATGAATTCTACTGCTACTGAAGAATATAAAGGCGTAATTAAATTAGGAACACAATCAGAAGTTAACTCGAATAATGCTTCTGTTGCTGTTACTGGTGCAACTCTTAATGGTCGTGGTTCTACAACGTCAATGAGAGGCGTAGTTAAATTAACTACAACTGCCGGCTCACAGAGTGGAGGTGATGCTTCATCAGCACTAGCTTGGAATGCTGACGTTATCCATCAAAGAGGCGGTCAAACTATTAATGGAACACTCCGCATTAATAACACGCTTACAATAGCTTCAGGTGGAGCAAATATTACCGGAACAGTTAACATGACCGGTGGTTATATTCAAGGTAAGCGTGTCGTAACACAAAATGAAATTGATAGAACTATTCCTGTCGGAGCTATTATGATGTGGGCCGCTGATAGTCTTCCTAGTGATGCTTGGCGTTTTTGCCACGGTGGAACTGTTTCAGCATCAGATTGTCCATTATATGCTTCTAGAATTGGAACAAGATACGGCGGAAGTTCATCAAATCCTGGATTACCTGATATGCGTGGTCTTTTTGTTCGCGGCTCTGGTCGTGGCTCTCACTTAACAAATCCAAATGTTAATGGTAATGACCAGTTTGGTAAGCCTAGATTAGGTGTAGGTTGTACTGGTGGATATGTTGGTGAAGTACAGAAACAACAGATGTCTTATCATAAACATGCTGGCGGATTTGGTGAGCATGATGATTCTGGGGCATTCGGTAATACCCGTAGATCAAATTTTGTTGGTACACGTAAAGGACTTGACTGGGATAACCGTTCATACTTCACCAATGATGGATATGAAATTGACCCGGCATCGCAGCGAAATTCCAAATATACGTTAAATCGCCCTGAATTAATTGGAAATGAAACACGTCCATGGAACATTTCTTTAAACTACATAATTAAGGTAAAAGAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
4f052bd3784a18dbe4e6faee15bb863844a646d66df3fda14894a388738752bf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6896
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome Sequences of Four Bacteriophages Infecting Toxigenic Escherichia coli (STEC) Dias,C., Almeida,C., Lobocka,M. and Oliveira,H. 2020-09-03 — GenBank