Protein

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Genbank accession
XYM58361.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MASKIQLRRSTVAGRIPDASALALGELAVNLPDGKVFLKQDDPVGVGTRIISINANPVGNTFYVNKNGDDNDTGTSEDRAFLTVKKAAGIATAYDTIVVAAGTFVEDNPIVLKDWVTIIGGDIRNCEISPANPDKDLIQLGQGGTVQDLSFVGVADTGSAIITYRPLVGVASDRYFDAARLIRANINFIANETVGYITSTDYKNPAIDIDSTNCRDDIKDVYRAICHDITRGGNSKCIGAGKSYFDINGDLDHIVGFGTTTIDAFDYSRQIARAVINNAVWAGTASTFAQTNVTNAVYGKASGILTVTSFSHGLDVRDVVKLENLQFSCPGGSGITTTFFPDGTFGYNFPVKKVISDNQFEVVVGASTITHTYQTGGTARKQKNYQTEFLQTRDESIQRDPVTGFNDAVNGCANVVSSIYTCVGIVTGIIKNGLDGNEATLGFTTTYPGNAGAGQTDPDAIPSQGVGIIRKGPYIRNCTNFVKNSIGAKIDGFNSDEGDQIDDIGVQGSFNVDAYTQFNQGNGIGVSVSNGAYCQLVSIFTICNDTAIVAQGGGQLDLTNSNSSFGTRGLVAKGVGDATSKCTDRYSGHIKTAQTKGESSIVVSGIGSNRPYNGQAIFVDELYNTVGDIVVTDGGSGYTSAPAVTIDFPTGIGNTIRAQATAQILNGKVTTITVLSGGLQYQSTPNVTISGGGGAGAAATAIMTPVYYTVDSSTLPSAGVSTVTFVQTLNNDVGIGSTVFFSRQSLQIASSHSFEYIGAGNTITLAYPSRGGVSNQENEVIKENGGEVIYTSTDERGNFRIGDGVIINQSTGTISGRDYSKSLFTQITPFILALGD
Physico‐chemical
properties
protein length:836 AA
molecular weight: 87734,35450 Da
isoelectric point:4,83259
aromaticity:0,08014
hydropathy:-0,08134

Domains

Domains [InterPro]
IPR012334
STR
62–106
IPR012334
XYM58361.1
1 836
Architecture
STR
STR 62-106 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYM58361.1
1 836
Domain Start End Length (AA) Confidence
N-terminal 1 112 112 0,8446
Central domain 113 326 215 0,9663
C-terminal 327 836 509 0,2872
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-112
Central
113-326
C-terminal
327-836

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage Sf-CH8
[NCBI] 		3413216 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYM58361.1 [NCBI]
Genbank nucleotide accession
PV340853.1 [NCBI]
CDS location
range 158644 -> 161154
strand +
CDS
ATGGCGAGCAAGATTCAACTAAGAAGATCTACCGTAGCAGGTAGAATTCCAGACGCAAGTGCTTTAGCTCTAGGGGAACTCGCTGTTAATCTTCCTGATGGAAAGGTTTTCCTGAAGCAGGATGATCCCGTTGGTGTTGGCACAAGAATCATCTCAATTAATGCCAATCCAGTTGGTAATACTTTTTATGTTAATAAGAATGGTGATGATAATGACACTGGTACGTCTGAAGACCGTGCATTTCTAACCGTAAAGAAAGCAGCAGGTATTGCTACTGCATATGATACGATTGTAGTTGCTGCTGGAACTTTCGTTGAAGATAACCCAATTGTTTTGAAAGATTGGGTGACGATTATTGGTGGTGATATTAGAAACTGTGAAATATCTCCAGCAAATCCTGATAAAGATTTGATCCAGCTGGGTCAAGGTGGAACGGTACAGGACCTTTCTTTCGTTGGTGTTGCTGATACTGGTTCTGCAATTATCACATATCGTCCTCTTGTAGGTGTTGCATCTGACAGGTATTTTGATGCTGCACGTTTGATCCGTGCAAATATCAATTTCATTGCTAATGAGACTGTAGGATATATTACTAGCACTGATTATAAGAACCCTGCTATCGATATTGATAGTACAAATTGTCGTGATGATATTAAGGATGTATATCGTGCCATCTGTCACGATATTACTAGAGGTGGTAACTCTAAGTGTATTGGTGCTGGTAAATCATATTTTGATATTAACGGAGACTTAGATCACATTGTTGGTTTCGGCACAACCACTATTGATGCATTTGATTACTCAAGACAGATTGCTAGAGCAGTCATCAATAATGCTGTCTGGGCTGGCACTGCATCTACCTTTGCACAAACTAACGTAACTAATGCTGTTTACGGTAAAGCATCTGGTATCCTTACAGTAACATCATTCAGTCATGGTCTCGATGTTCGTGATGTAGTAAAACTAGAGAATCTACAATTCTCATGTCCTGGTGGATCAGGTATTACAACTACCTTCTTCCCTGATGGTACATTTGGATATAACTTCCCAGTAAAGAAAGTAATTAGTGATAATCAGTTTGAGGTTGTTGTAGGTGCTTCTACCATCACTCACACATATCAAACGGGTGGAACTGCGAGAAAGCAGAAGAATTATCAAACAGAATTCTTACAAACTAGAGACGAATCTATTCAAAGAGATCCTGTAACTGGATTTAATGATGCTGTCAATGGATGTGCAAATGTAGTTTCTTCAATTTACACTTGCGTCGGTATTGTTACTGGAATCATCAAAAATGGTCTTGATGGTAATGAGGCAACTCTAGGATTCACTACAACATATCCCGGTAATGCTGGAGCTGGTCAGACTGATCCTGATGCAATTCCTTCTCAGGGTGTTGGTATTATTCGTAAAGGTCCATACATCAGAAACTGCACCAACTTCGTTAAGAATAGTATTGGTGCAAAGATTGATGGATTTAACTCTGATGAAGGAGATCAGATTGATGATATCGGAGTACAGGGTTCATTCAACGTAGATGCCTATACTCAATTCAACCAAGGAAATGGAATTGGTGTATCGGTATCTAATGGTGCATATTGTCAGTTAGTTTCTATTTTCACCATCTGCAATGATACTGCTATCGTTGCACAAGGTGGTGGTCAACTTGACCTAACTAACTCCAACTCATCTTTTGGTACTAGAGGACTAGTTGCAAAAGGTGTTGGTGATGCAACTTCCAAGTGTACTGATAGATATTCTGGTCATATTAAGACTGCTCAGACTAAAGGTGAATCGTCAATTGTTGTGAGTGGTATTGGTTCAAACAGACCATATAATGGCCAAGCAATTTTTGTTGATGAACTATATAATACAGTAGGTGATATTGTCGTAACTGATGGTGGTTCTGGATATACTTCTGCTCCGGCAGTAACTATTGATTTCCCAACTGGTATTGGTAATACCATTCGTGCTCAGGCAACAGCACAGATTTTGAATGGTAAGGTGACGACTATCACTGTTCTAAGTGGTGGTCTACAATATCAGTCAACTCCCAACGTAACTATTTCTGGTGGTGGAGGTGCTGGTGCTGCCGCTACGGCAATCATGACACCAGTTTATTATACTGTAGACTCTTCTACACTCCCATCTGCTGGAGTCAGTACAGTCACTTTTGTACAGACTCTAAATAATGACGTTGGTATTGGATCTACCGTTTTCTTCTCAAGACAGAGTTTGCAAATTGCATCCTCTCATTCTTTTGAATATATCGGTGCTGGTAATACTATTACATTAGCATATCCATCTCGCGGTGGTGTTTCCAATCAGGAAAACGAAGTTATTAAAGAGAATGGTGGTGAAGTAATTTACACCAGTACTGATGAACGAGGTAACTTTAGAATTGGTGATGGTGTTATCATCAATCAGAGCACTGGTACTATTTCTGGACGAGATTATTCCAAGAGTTTGTTCACCCAAATTACCCCATTCATTCTGGCACTAGGAGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2f686eb54b4fa3b79048fbe1ae91400c5363b6e1a2d1a7f7f65c3d47fec719c5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8783
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50