Protein

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Genbank accession
XYM58361.1 [GenBank]
Protein name
putative major tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
TF
Evidence Phold
Probability 1,00
Protein sequence
MASKIQLRRSTVAGRIPDASALALGELAVNLPDGKVFLKQDDPVGVGTRIISINANPVGNTFYVNKNGDDNDTGTSEDRAFLTVKKAAGIATAYDTIVVAAGTFVEDNPIVLKDWVTIIGGDIRNCEISPANPDKDLIQLGQGGTVQDLSFVGVADTGSAIITYRPLVGVASDRYFDAARLIRANINFIANETVGYITSTDYKNPAIDIDSTNCRDDIKDVYRAICHDITRGGNSKCIGAGKSYFDINGDLDHIVGFGTTTIDAFDYSRQIARAVINNAVWAGTASTFAQTNVTNAVYGKASGILTVTSFSHGLDVRDVVKLENLQFSCPGGSGITTTFFPDGTFGYNFPVKKVISDNQFEVVVGASTITHTYQTGGTARKQKNYQTEFLQTRDESIQRDPVTGFNDAVNGCANVVSSIYTCVGIVTGIIKNGLDGNEATLGFTTTYPGNAGAGQTDPDAIPSQGVGIIRKGPYIRNCTNFVKNSIGAKIDGFNSDEGDQIDDIGVQGSFNVDAYTQFNQGNGIGVSVSNGAYCQLVSIFTICNDTAIVAQGGGQLDLTNSNSSFGTRGLVAKGVGDATSKCTDRYSGHIKTAQTKGESSIVVSGIGSNRPYNGQAIFVDELYNTVGDIVVTDGGSGYTSAPAVTIDFPTGIGNTIRAQATAQILNGKVTTITVLSGGLQYQSTPNVTISGGGGAGAAATAIMTPVYYTVDSSTLPSAGVSTVTFVQTLNNDVGIGSTVFFSRQSLQIASSHSFEYIGAGNTITLAYPSRGGVSNQENEVIKENGGEVIYTSTDERGNFRIGDGVIINQSTGTISGRDYSKSLFTQITPFILALGD
Physico‐chemical
properties
protein length:836 AA
molecular weight: 87734,35450 Da
isoelectric point:4,83259
aromaticity:0,08014
hydropathy:-0,08134

Domains

Domains [InterPro]
IPR012334
62–106
IPR012334
XYM58361.1
1 836
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage Sf-CH8
[NCBI] 		3413216 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYM58361.1 [NCBI]
Genbank nucleotide accession
PV340853 [NCBI]
CDS location
range 158644 -> 161154
strand +
CDS
ATGGCGAGCAAGATTCAACTAAGAAGATCTACCGTAGCAGGTAGAATTCCAGACGCAAGTGCTTTAGCTCTAGGGGAACTCGCTGTTAATCTTCCTGATGGAAAGGTTTTCCTGAAGCAGGATGATCCCGTTGGTGTTGGCACAAGAATCATCTCAATTAATGCCAATCCAGTTGGTAATACTTTTTATGTTAATAAGAATGGTGATGATAATGACACTGGTACGTCTGAAGACCGTGCATTTCTAACCGTAAAGAAAGCAGCAGGTATTGCTACTGCATATGATACGATTGTAGTTGCTGCTGGAACTTTCGTTGAAGATAACCCAATTGTTTTGAAAGATTGGGTGACGATTATTGGTGGTGATATTAGAAACTGTGAAATATCTCCAGCAAATCCTGATAAAGATTTGATCCAGCTGGGTCAAGGTGGAACGGTACAGGACCTTTCTTTCGTTGGTGTTGCTGATACTGGTTCTGCAATTATCACATATCGTCCTCTTGTAGGTGTTGCATCTGACAGGTATTTTGATGCTGCACGTTTGATCCGTGCAAATATCAATTTCATTGCTAATGAGACTGTAGGATATATTACTAGCACTGATTATAAGAACCCTGCTATCGATATTGATAGTACAAATTGTCGTGATGATATTAAGGATGTATATCGTGCCATCTGTCACGATATTACTAGAGGTGGTAACTCTAAGTGTATTGGTGCTGGTAAATCATATTTTGATATTAACGGAGACTTAGATCACATTGTTGGTTTCGGCACAACCACTATTGATGCATTTGATTACTCAAGACAGATTGCTAGAGCAGTCATCAATAATGCTGTCTGGGCTGGCACTGCATCTACCTTTGCACAAACTAACGTAACTAATGCTGTTTACGGTAAAGCATCTGGTATCCTTACAGTAACATCATTCAGTCATGGTCTCGATGTTCGTGATGTAGTAAAACTAGAGAATCTACAATTCTCATGTCCTGGTGGATCAGGTATTACAACTACCTTCTTCCCTGATGGTACATTTGGATATAACTTCCCAGTAAAGAAAGTAATTAGTGATAATCAGTTTGAGGTTGTTGTAGGTGCTTCTACCATCACTCACACATATCAAACGGGTGGAACTGCGAGAAAGCAGAAGAATTATCAAACAGAATTCTTACAAACTAGAGACGAATCTATTCAAAGAGATCCTGTAACTGGATTTAATGATGCTGTCAATGGATGTGCAAATGTAGTTTCTTCAATTTACACTTGCGTCGGTATTGTTACTGGAATCATCAAAAATGGTCTTGATGGTAATGAGGCAACTCTAGGATTCACTACAACATATCCCGGTAATGCTGGAGCTGGTCAGACTGATCCTGATGCAATTCCTTCTCAGGGTGTTGGTATTATTCGTAAAGGTCCATACATCAGAAACTGCACCAACTTCGTTAAGAATAGTATTGGTGCAAAGATTGATGGATTTAACTCTGATGAAGGAGATCAGATTGATGATATCGGAGTACAGGGTTCATTCAACGTAGATGCCTATACTCAATTCAACCAAGGAAATGGAATTGGTGTATCGGTATCTAATGGTGCATATTGTCAGTTAGTTTCTATTTTCACCATCTGCAATGATACTGCTATCGTTGCACAAGGTGGTGGTCAACTTGACCTAACTAACTCCAACTCATCTTTTGGTACTAGAGGACTAGTTGCAAAAGGTGTTGGTGATGCAACTTCCAAGTGTACTGATAGATATTCTGGTCATATTAAGACTGCTCAGACTAAAGGTGAATCGTCAATTGTTGTGAGTGGTATTGGTTCAAACAGACCATATAATGGCCAAGCAATTTTTGTTGATGAACTATATAATACAGTAGGTGATATTGTCGTAACTGATGGTGGTTCTGGATATACTTCTGCTCCGGCAGTAACTATTGATTTCCCAACTGGTATTGGTAATACCATTCGTGCTCAGGCAACAGCACAGATTTTGAATGGTAAGGTGACGACTATCACTGTTCTAAGTGGTGGTCTACAATATCAGTCAACTCCCAACGTAACTATTTCTGGTGGTGGAGGTGCTGGTGCTGCCGCTACGGCAATCATGACACCAGTTTATTATACTGTAGACTCTTCTACACTCCCATCTGCTGGAGTCAGTACAGTCACTTTTGTACAGACTCTAAATAATGACGTTGGTATTGGATCTACCGTTTTCTTCTCAAGACAGAGTTTGCAAATTGCATCCTCTCATTCTTTTGAATATATCGGTGCTGGTAATACTATTACATTAGCATATCCATCTCGCGGTGGTGTTTCCAATCAGGAAAACGAAGTTATTAAAGAGAATGGTGGTGAAGTAATTTACACCAGTACTGATGAACGAGGTAACTTTAGAATTGGTGATGGTGTTATCATCAATCAGAGCACTGGTACTATTTCTGGACGAGATTATTCCAAGAGTTTGTTCACCCAAATTACCCCATTCATTCTGGCACTAGGAGACTAA

Tertiary structure

PDB ID
2f686eb54b4fa3b79048fbe1ae91400c5363b6e1a2d1a7f7f65c3d47fec719c5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8783
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50