Protein

View in Explore
Genbank accession
BBL19311.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MSTILESAKAYIENTENARLAHLVSLELPGEQGVFVYFTDYFRDITYKGTTYQSGIVKRVGDVKQTKELSIYRVPVQVSGAIDQEIDRVLNSQSFLNRKIKIYRVFLDDDGDIIPMYSNGDTVTYFEGIIVTSSLDESNTVKGKGRSIITWNCASKLYALDAVNGRLTDDASHRGLINVNGVMQPSGAAKKPEYQLDKGFFHANKSVKLLAEYQTKEKRYRLKKRRAGGFRGLMGQKHYDMEEYWADVVKEVDMDINLTAKYIPVVYGVQKVSGIPIFFDTDIANPEEVWAVYAFCEGEVDGFLDIYFGDNPMICISENDKSKRACIGMKRTNGDTIGALAPEGGRSVPSTHGQHYVYDDGNGPIEFWTFHGSSTQSASKELVSKAASGEFKLQNDNNYGAEYWDDSFKLLDTAYLVVKYELNENRTSIPEVSAEVQGKKVPVYHKDGSITNDKTSLNLAWQTLDYLRSNTYGAGLTLDEINLSSVQECADLMDAIDSSYQPDWVPYWRYLGWTDYQEENRQILQGSAILSTSDTVFKNVQALIAQFDASLNIVSGKYTLTMEADKPVVYDIDEGDIIDGSLKVADNSMENKYNSVQASIIDPASAWGSNTITFFNKDYKVEDNGKDRKANITFPFITNYYTARTRAEYYLKKSRYNRTVTFELPFTFLWLYPNANITLTKKRYKWDKKHFLIQNMTWKTNGRISVTAREYAPDVFINSPQTDNSDEQIPEVVVGVLPPRDLTYAPRVGESKVGLNGTLSWLPSLTKRVTYYTIKYTGLTDLITVPVTGTESLNARLEFPLYNLAEGEYTFEVRAVSPEGDTSLPATLVVHVNPSAILPKVENLRLINRTDTSDRVFIGKDVELLWDELLEGSLVSGFKYRLRFMDGDTGEVLRDTTTTSVGYTYTYVTNKEDYKRVHGTLGISRNILIHIRGEADNNITSIDWTVL
Physico‐chemical
properties
protein length:947 AA
molecular weight: 106902,86990 Da
isoelectric point:5,24757
aromaticity:0,11088
hydropathy:-0,39630

Domains

Domains [InterPro]
DC_0187
STR
242–943
DC_0187
IPR032876
ATT
539–695
IPR032876 IPR003961
BBL19311.1
1 947
Architecture
STR
ATT
STR
STR 242-538 | ATT 539-695 | STR 696-943 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BBL19311.1
1 947
Domain Start End Length (AA) Confidence
N-terminal 1 307 307 0,9146
Central domain 308 522 216 0,4409
C-terminal 523 947 424 0,0362
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-307
Central
308-522
C-terminal
523-947

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage KIT04
[NCBI] 		2508207 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BBL19311.1 [NCBI]
Genbank nucleotide accession
LC487410.1 [NCBI]
CDS location
range 94559 -> 97402
strand -
CDS
ATGAGTACTATATTAGAGTCTGCAAAGGCTTACATAGAAAATACAGAAAACGCTAGATTAGCCCATCTTGTCTCATTAGAGCTACCGGGAGAGCAAGGTGTTTTTGTATACTTTACCGACTACTTTAGAGATATTACTTATAAAGGGACAACATACCAATCAGGTATAGTAAAACGTGTAGGGGATGTAAAGCAAACAAAAGAATTAAGTATCTACAGAGTCCCAGTGCAGGTAAGTGGAGCTATAGACCAAGAGATTGATAGAGTGTTAAACTCTCAAAGTTTCTTAAATAGAAAGATAAAAATATATAGAGTATTCCTAGATGACGACGGGGATATCATCCCTATGTACTCTAACGGAGATACGGTAACGTATTTTGAAGGTATTATAGTTACTAGTTCCCTAGATGAATCTAACACCGTAAAAGGTAAGGGACGTTCAATTATTACTTGGAATTGTGCTAGTAAGTTATACGCTCTAGATGCTGTTAACGGTAGGCTTACGGATGATGCCTCGCATAGAGGACTTATTAACGTCAACGGGGTTATGCAACCTTCCGGAGCAGCTAAGAAACCTGAATATCAGCTAGATAAGGGTTTCTTCCATGCCAACAAATCCGTCAAGCTCCTAGCTGAGTATCAAACTAAAGAAAAACGTTACAGACTTAAAAAGAGACGTGCTGGAGGTTTCAGGGGTCTCATGGGGCAAAAACACTATGATATGGAAGAATACTGGGCAGATGTAGTAAAAGAAGTTGACATGGATATCAACTTAACAGCCAAGTATATCCCTGTAGTTTATGGAGTCCAGAAAGTATCCGGTATACCTATCTTCTTTGATACCGATATAGCTAACCCAGAGGAGGTTTGGGCTGTATACGCTTTCTGTGAGGGAGAGGTAGATGGATTCTTGGATATATACTTTGGCGATAACCCTATGATTTGTATATCAGAGAACGATAAGTCAAAGCGTGCATGTATTGGTATGAAACGTACTAACGGCGATACCATTGGAGCGCTAGCACCTGAAGGTGGTAGGTCAGTACCTAGCACACATGGACAACACTATGTATATGACGACGGTAATGGTCCAATAGAGTTCTGGACGTTTCATGGCTCTAGCACACAGAGTGCGTCCAAGGAGTTAGTTAGTAAAGCAGCAAGTGGCGAGTTTAAGCTACAAAACGATAATAACTATGGTGCTGAGTACTGGGACGACTCTTTCAAGCTATTGGATACCGCATACTTAGTAGTTAAGTATGAGCTGAATGAAAACCGCACTTCGATACCAGAGGTGTCCGCTGAAGTTCAAGGTAAAAAGGTTCCGGTATATCATAAAGATGGTTCTATAACTAATGATAAAACATCCCTAAACCTAGCCTGGCAAACACTAGACTATCTAAGAAGTAATACTTATGGTGCAGGGCTTACTTTAGACGAAATAAACTTATCCTCTGTTCAAGAGTGTGCTGACTTGATGGACGCTATTGATTCTTCCTATCAGCCTGACTGGGTACCTTATTGGAGATATTTAGGCTGGACAGACTACCAAGAGGAGAATAGGCAAATACTTCAGGGCTCTGCTATACTATCTACTAGTGACACAGTGTTTAAGAATGTGCAGGCTTTGATAGCTCAGTTTGATGCGTCCTTAAATATAGTAAGTGGTAAGTATACTCTTACTATGGAGGCTGATAAACCTGTAGTGTACGATATTGATGAAGGAGATATTATAGATGGCAGTTTGAAAGTAGCTGATAACTCTATGGAGAACAAATATAACTCCGTGCAGGCTAGTATTATAGACCCTGCCAGTGCCTGGGGTAGTAACACGATAACTTTCTTCAATAAAGATTATAAAGTAGAAGATAATGGTAAAGATAGAAAAGCGAACATCACTTTTCCTTTCATAACTAACTACTACACGGCACGTACCAGAGCAGAGTACTACCTAAAAAAGTCTAGATATAATAGAACAGTTACTTTTGAGTTACCTTTCACTTTCCTATGGTTATACCCTAACGCTAATATCACTCTAACTAAGAAAAGATATAAATGGGATAAGAAACACTTTCTAATTCAGAACATGACTTGGAAAACTAACGGACGTATAAGTGTAACTGCTAGAGAATATGCTCCGGATGTATTTATAAATTCTCCACAAACAGATAATAGCGACGAACAAATACCAGAAGTAGTAGTTGGAGTACTACCTCCTAGAGACCTGACCTATGCTCCTAGGGTAGGGGAAAGTAAGGTAGGTCTTAATGGTACTTTATCATGGCTACCTAGCCTTACTAAGCGTGTAACATACTACACTATTAAATATACTGGACTGACTGATTTAATAACAGTTCCAGTTACTGGTACAGAGTCTTTAAATGCTAGATTAGAATTTCCTTTATATAATCTAGCAGAGGGAGAATATACTTTCGAGGTTAGAGCAGTGTCACCGGAGGGGGATACTAGCTTACCTGCAACATTGGTAGTCCATGTAAATCCTAGCGCCATATTGCCAAAAGTAGAGAATTTACGACTTATAAACAGAACAGATACTTCTGATAGAGTATTTATAGGTAAGGATGTTGAGCTTCTATGGGATGAGTTATTAGAAGGCTCTCTAGTCTCTGGTTTTAAATATAGATTGAGATTTATGGACGGGGACACTGGTGAAGTACTTCGCGATACAACCACAACCTCAGTAGGGTATACTTATACATATGTTACGAACAAAGAAGACTATAAAAGAGTACATGGTACTCTTGGTATAAGCAGAAATATTTTAATACATATTAGAGGGGAAGCTGATAATAATATAACCTCTATTGATTGGACAGTACTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e8da2d042a48ab03a007754ff8629f11b714c422d196d5653c48a81d09f70f7c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7950
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Vibrio parahaemolyticus bacteriophage KIT04 Vo,T.T.A., Pham-Khanh,N.H. and Kamei,K. 2023-02 — GenBank