Protein

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Genbank accession
AIX38033.1 [GenBank]
Protein name
sericin 1 precursor-like protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,51
TF
Evidence Phold
Probability 1,00
Protein sequence
MSQINTDAIRNQAGEGQGIDIANGGNISFNTDTLYVDATNDRVGFGTTLPQAKLHMIGGFGLNANTAPIIEGINIVTDSINGSPNIRVDTDGPSHIFTTASTGNFTINIGTGTNAGTDLSSVMDVGQYISVTAIVALGASSGFCNTINLGGAANTTYWVGGEVPDEVGDTSGYDIYYIQIHRNAASTYYVLAGKGHYSS
Physico‐chemical
properties
protein length:199 AA
molecular weight: 20610,34090 Da
isoelectric point:4,30921
aromaticity:0,08040
hydropathy:-0,05226

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-MbCM6
[NCBI] 		3126011 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIX38033.1 [NCBI]
Genbank nucleotide accession
KJ019128 [NCBI]
CDS location
range 29355 -> 29954
strand +
CDS
ATGTCACAAATAAATACAGACGCAATTAGAAATCAAGCAGGAGAGGGTCAAGGTATTGATATTGCCAATGGTGGTAATATTTCATTTAATACTGATACTCTTTACGTTGATGCTACAAACGATCGCGTTGGGTTTGGTACTACATTACCCCAAGCAAAGTTGCACATGATTGGTGGATTTGGTCTAAATGCCAATACTGCTCCTATTATTGAAGGTATCAATATTGTTACTGATTCTATTAATGGATCACCCAACATTAGAGTTGATACTGATGGTCCAAGTCATATATTTACAACTGCAAGCACAGGTAACTTTACAATTAATATTGGCACAGGAACAAATGCTGGCACAGATTTAAGTAGTGTTATGGATGTTGGGCAGTATATTTCTGTCACTGCAATTGTAGCATTAGGTGCATCTTCAGGTTTCTGTAATACCATCAATCTGGGTGGTGCTGCTAATACTACATATTGGGTTGGTGGTGAAGTACCTGATGAAGTAGGTGATACATCTGGATATGACATATATTATATTCAGATACATAGAAATGCTGCATCCACGTATTACGTCCTTGCTGGCAAGGGTCACTACTCTTCATAA

Tertiary structure

PDB ID
1bde287211b69040ff98423b243fd29c5eddfc288f9dd104f0f24b47e89cc94a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7302
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank