Protein

View in Explore
Genbank accession
ULR75131.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence Phold
Probability 1,00
Protein sequence
MALKLSNNAVGYLAAALPSDSTAIALRPGEGASFPNLSAGDWCPGTLIASTGEIEVVRVTARAGDSFTVERAQEGTAARQFKPGDRFEHRLTAAALMSIVADVLARLPITGGTITGDLSIDGTLAAGSVDAATLKRAGKAVWDAGNFTPGDYARRDGADFVGLVRTAQTNSPMAQNDTTCSLDVRNSGGSGDAALAALMFECVGSYATKLGLRADGYFGLGSGSSQAWRWYSAANGDMVAAGNVGAYSDPRLKDDIEPILGALEIIRRLTGVRFTWNDRTQLVGKIGARDIGVLADEVEAVLPEVVGRSMPDEGNGGERWRTVAYDKLVPVLIEAVKELAARLDLLEA
Physico‐chemical
properties
protein length:348 AA
molecular weight: 36407,58300 Da
isoelectric point:4,87448
aromaticity:0,06322
hydropathy:-0,01494

Domains

Domains [InterPro]
IPR030392
248–348
IPR030392
IPR030392
248–306
IPR030392
ULR75131.1
1 348
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage JC1
[NCBI] 		2914166 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ULR75131.1 [NCBI]
Genbank nucleotide accession
OM283127.1 [NCBI]
CDS location
range 36484 -> 37530
strand +
CDS
ATGGCTCTCAAACTTTCCAATAACGCGGTCGGCTATCTGGCCGCAGCGCTGCCTTCCGATAGTACGGCTATCGCGCTTCGCCCCGGCGAAGGAGCATCGTTTCCGAACCTTTCCGCTGGTGACTGGTGTCCCGGCACGCTGATCGCGTCGACGGGCGAGATCGAGGTCGTGCGCGTGACGGCGCGCGCTGGCGACTCGTTCACGGTCGAGCGTGCGCAGGAGGGCACCGCGGCGCGGCAGTTCAAACCCGGCGACCGTTTCGAGCACCGGCTGACCGCTGCTGCCCTGATGAGCATCGTCGCCGACGTGCTCGCGCGACTGCCGATCACCGGCGGAACGATCACCGGAGATCTTTCCATCGACGGCACACTCGCGGCGGGCTCGGTCGACGCGGCGACGCTCAAGCGCGCCGGCAAGGCGGTGTGGGACGCTGGAAACTTCACCCCCGGCGACTATGCGCGGCGTGATGGTGCCGACTTCGTTGGCCTCGTGCGCACCGCACAGACGAACAGCCCGATGGCGCAGAACGACACCACGTGCTCGCTCGACGTGCGCAACAGCGGCGGCAGTGGCGATGCGGCGCTCGCCGCGCTCATGTTCGAGTGCGTCGGCAGCTACGCGACGAAGCTCGGGCTGCGCGCTGACGGTTACTTCGGGCTCGGCAGCGGCAGCTCGCAGGCATGGCGCTGGTACAGCGCGGCGAACGGCGACATGGTGGCGGCAGGCAACGTCGGCGCCTACTCGGACCCGCGCCTGAAGGACGACATCGAGCCGATCCTCGGCGCGCTCGAGATCATCCGCCGGCTCACCGGCGTGCGCTTCACCTGGAACGACCGCACGCAGCTCGTCGGCAAGATCGGCGCGCGCGACATCGGCGTGCTCGCGGACGAGGTAGAGGCCGTGCTGCCTGAGGTCGTCGGGCGCTCGATGCCTGACGAGGGGAACGGCGGCGAGCGCTGGCGCACCGTCGCCTACGACAAGCTGGTGCCGGTGCTTATCGAGGCGGTGAAGGAACTCGCAGCGCGGCTCGATCTGCTGGAGGCGTGA

Tertiary structure

PDB ID
ffb01b7300028193dc6d55f4017f2936825dfcefece4b120a58802237738295e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7785
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The isolation and characterization of a broad host range Bcep22-like podovirus JC1 Davis,C.M., Cole,J. and Dennis,J. — — GenBank