Protein

View in Explore
Genbank accession
XLL21597.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTYGFQLRNGAGKYINYGQEINYHFWAKVTITGSRSNVQLRTIPASWKAKVFVHCNQDVSFNTCSIYQNSGDIRATTMSSNGATFSLYIFVPANRVPRGGWGMVLWNSAGVEAFNTSRPLLKIYGLTTITTPSQSIGTSRAVAAFCQQQTINAVPNFGVNATEFWLYTTMGFDRKVTTGTSRIGAVSGVVGQSPIQNNVRVPFIDKAHFDKFGSLGNP
Physico‐chemical
properties
protein length:218 AA
molecular weight: 23902,79630 Da
isoelectric point:9,91674
aromaticity:0,12385
hydropathy:-0,12477

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLL21597.1
1 218
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,5649
Central domain 11 205 196 0,0006
C-terminal 206 218 12 0,9983
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-205
C-terminal
206-218

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1F273_PE002
[NCBI] 		3385364 No lineage information
Host Vibrio cyclitrophicus 1F273
[NCBI] 		1136161 Pseudomonadota > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio > Vibrio cyclitrophicus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLL21597.1 [NCBI]
Genbank nucleotide accession
PQ189384 [NCBI]
CDS location
range 39026 -> 39682
strand +
CDS
GTGACTTACGGATTTCAACTTAGAAATGGTGCAGGTAAGTATATAAACTATGGTCAAGAAATTAACTATCATTTCTGGGCCAAGGTTACGATAACTGGTAGTCGAAGCAATGTTCAACTGCGCACGATACCAGCGAGCTGGAAAGCTAAGGTATTTGTTCATTGTAATCAAGATGTGAGCTTTAACACATGTTCGATCTATCAAAATTCTGGCGATATTCGTGCAACTACAATGTCATCAAATGGCGCAACATTTAGCTTGTATATTTTTGTTCCTGCTAATCGGGTCCCTAGAGGCGGGTGGGGAATGGTGCTTTGGAATTCCGCAGGGGTAGAGGCATTCAATACGAGCAGGCCGCTACTTAAAATTTACGGCCTAACAACTATTACAACGCCATCGCAGTCGATTGGTACATCTAGGGCGGTGGCTGCATTTTGTCAGCAGCAGACAATTAACGCGGTGCCTAACTTTGGGGTTAATGCGACTGAGTTCTGGTTGTATACAACGATGGGGTTTGATCGAAAAGTGACGACCGGGACAAGTCGCATTGGCGCTGTTTCGGGAGTTGTCGGTCAGTCGCCAATTCAGAATAATGTTCGAGTACCATTTATTGATAAGGCTCATTTCGACAAGTTTGGGTCGTTGGGTAATCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
293b4db903cd8ce0baafeaf6a85e8a11899a933b32bf4e7b340344652fbe0a3f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7041
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50