Protein

View in Explore
Genbank accession
WDS61269.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAKKLLYDYVFDASAQTVTINGHVDLKKLLFINNATRGTTIYALGDSNLRVTNTSYASATDQTTFTLNFDTSTANHADADKLQIFIDEEGAEFKPTETFVDPVSKLRVSNPNTLIDTDFEYGLQSTKWETLERIHQVPSFYSSTGDVPLEGVDKIESVNNSKEVTVTMKAPHGLVNGIPLDIRGLSDLFAEGTFIIKAVPSDKTFVYETTRALTTTGDLKTVYTNVIVGRFYVGSKLDFGQYSAVTTDQATQSTLTITTPVETNFALGTQFYITNSIAVKRKEFDGRSFTSGGAVDWEENISQYETNQMTLWEPKGTDTQQFLVANASYMDSSTNTITHNINGTATNHGLVTGDMMFMVYKNGNVTGFQAAGQTGTNASSTNPGNGIYYVIRIDDQNYQLADSASNCAGSNPVSFTLSDAAQAATQLEMTLFGRGYQSTTMNPYEFDIIEAGRTDDDAWGRKQRYFWPESINVSTDQIKIPRHEFKDGQPVVFVSGPSPNSVPGNMSNGYPYYIKYVDADTIRLTSSFSSRDPNHEGPYYGAGVGGQLNITSQGNLYTWGTPFSLWPAIKLAYTVTNNASGGSQNSTSWANRNRIICEHSIVNFVEGDKVVFFSQSNVPSGITETNNNWDQNMKDRIYYVRFPAINTGVSTNNFEFSVSRTPNGPLVDVTGWSNTENSFVLKIEELATSNTWFSTQHGFDNNEEGEPNYWLKYRFDAQNSTGSTVGGMTANHWYWMIPVTNNHFRVTLASSSTSNTQPSSTNQIPQKNARSNIINITSFSGDVTNFRHKFRGEDIDNPYEDTFYIPNHGFTSGTAVRYNSNGNPSIGGLQNGTTYYVRNASTDRFELTTTFDGVRLNMSSGSATSTPNHYFEDVSPKGAIDGSFEITAKNADNLSYDLQADTQIFGKTLTFQPQKCIDLKRGKFRINDHGLKTGVSVVYTKDAAGTSIGQNPPPDAAQQAAGYNSLTSGDTYYVYRVSKDYFGLATTLANAQAGTIITEYFNFGDAVTTNRQHTLYANSVFGEVTGNGLLTYTTKDKTWDGSSNSNVNTYSNYLTIGTHEFYNGDEVEYNGFAGATPIVGLEFGQKYFIHRWGSTIISFHKTRSDSYRRRNQIRIFGPGTGSLHVVRIATNLLKGTVDRGKWNSTSEYFAGDIVQHPYSYQGQTTDLYYVATQDSQGNYDDLRYNYSNANNVGRTPPNSVRDAWWKRLNDYTQPVSTGGGLETNMINQYTPGESILMDDERYVGYGYGYGYYNYNSVSNGGTTVSVPGSTYHNFEIGDGVYYRNEGKWRALEDDIDSGSIPTDYSGLVDGSIYFVNTINYYQFTLHQNPEDARQGVNPITLGHSTGNSSYWSQHRFYKTESRVVSAKIRSISDSDEMTVDEPQTPAVITFDPQETTPITVCDITTEIFYFGTTDDEGNDITDQMLTGTRVIYSHDDNSTAIGGLTKDANYFLINLGDGYFRLAGNGTNDYTRRQYAYSGNRTNITNTGQGNKHSISISTENYNNVSYLLPTALYVKPSSYALHRPFDGGVEINPGTSADSSVVRQTRRYFRYQSGKGLQYSTATNYNPPIEVRSLVGGTDGNGDPIATVVTRRPHYMNVGDHLSMRDTSVATGTNHYNTENGVVATVTDDFTLTYTLAGTPSDITPAGFPTLNKNSWTNSVVRAGMFDDQNGFFFEYDGQYLYAVRRSSTQQCAGTVTCTYGSQIVDGNGTVFTKQLAPDDYVIIRGQSYKIAFVVSDTRLYLTRTYQGITSPQIIMTKTEDTKTRQSNFNIDRCDGSGQTGFEMDLKKLQMCYIDYSWYGGGKIRYGFKDQFGKVFYAHQYVHSNKFTEAYFRSGNLPARYEVANIGDRTGTARFSPSLFHWGASVIMDGLFEDDKAYLFSSSTDTIYLLNQKSDGDEDQANREYPMLSLRLAPSVDAGVTGNLGTRDLINRMQLQMKQVSITISDGGNSVDSFTNNQNQDPRKSCTVKLLLNADLSQPNWDAVQAPSLSEVIQHSHSTDTEFAKLTDRTNAGINIFEFRAAANDTTVVELGDVATLGNSILGGDYTFPNGPDTLTIVVIPDDSYQSSSRRYTICSARISWSESQA
Physico‐chemical
properties
protein length:2087 AA
molecular weight: 231182,91260 Da
isoelectric point:5,12082
aromaticity:0,11739
hydropathy:-0,52726

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-BM3
[NCBI] 		753087 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDS61269.1 [NCBI]
Genbank nucleotide accession
OQ319121 [NCBI]
CDS location
range 116054 -> 122317
strand -
CDS
ATGGCAAAGAAATTACTTTACGATTACGTATTTGACGCTTCAGCGCAAACAGTGACAATCAATGGTCACGTTGATCTGAAGAAACTTCTGTTTATCAATAATGCTACTAGAGGCACTACAATTTATGCTCTGGGTGACTCAAACCTAAGAGTTACAAATACCTCGTATGCATCAGCAACGGATCAAACAACGTTCACTCTGAACTTTGATACGTCAACTGCTAACCATGCAGATGCCGACAAGCTCCAAATTTTTATTGATGAAGAGGGCGCAGAGTTCAAACCAACTGAAACTTTCGTTGATCCAGTTAGTAAACTGAGAGTTTCAAACCCAAACACTCTGATTGATACCGACTTTGAGTACGGTCTTCAGTCAACTAAGTGGGAAACACTTGAGAGAATCCACCAAGTTCCATCTTTCTATTCCTCCACGGGCGACGTTCCTCTGGAAGGCGTTGACAAAATTGAATCTGTAAATAATTCAAAAGAAGTCACCGTCACCATGAAGGCTCCTCATGGTCTTGTCAACGGTATTCCTCTGGATATCCGTGGTCTTTCTGATCTTTTTGCGGAAGGTACTTTCATCATCAAAGCGGTTCCTAGCGATAAAACCTTTGTATATGAAACAACCAGAGCTCTGACCACAACAGGAGATCTCAAAACAGTTTATACTAACGTAATTGTTGGTAGATTCTACGTTGGTTCTAAACTTGATTTCGGTCAGTATTCTGCTGTTACTACTGACCAGGCAACTCAAAGTACCCTGACGATCACTACCCCAGTAGAAACAAACTTTGCTCTGGGCACTCAGTTCTACATCACAAACTCTATTGCTGTAAAGAGAAAAGAGTTTGATGGTAGATCATTTACTTCAGGTGGTGCTGTTGACTGGGAAGAGAATATTTCTCAGTATGAAACAAACCAGATGACTCTTTGGGAACCAAAGGGTACAGATACTCAGCAGTTCCTGGTAGCAAATGCAAGCTACATGGACTCATCAACAAATACCATCACTCATAACATCAACGGTACTGCTACCAATCATGGATTGGTTACAGGTGACATGATGTTCATGGTGTATAAGAATGGTAACGTTACTGGATTCCAAGCTGCTGGTCAAACTGGTACGAACGCATCGTCCACAAACCCAGGCAATGGCATCTACTATGTTATCAGAATTGATGATCAAAACTATCAACTTGCAGATAGTGCATCAAACTGTGCAGGAAGTAATCCAGTTTCATTCACCCTGTCTGATGCTGCACAGGCTGCTACTCAGTTGGAGATGACATTGTTCGGTAGAGGTTATCAGTCTACCACAATGAACCCATATGAGTTTGACATTATTGAAGCTGGTCGAACAGATGATGATGCATGGGGTAGAAAGCAAAGATACTTCTGGCCAGAATCAATCAACGTATCAACAGATCAAATCAAGATTCCTCGCCACGAATTCAAAGATGGCCAACCAGTAGTCTTCGTTTCTGGACCTTCGCCTAACAGTGTTCCAGGTAACATGTCTAATGGTTATCCCTACTATATCAAGTATGTTGATGCTGATACCATTCGTCTGACATCAAGTTTCTCATCTAGAGATCCTAACCACGAAGGTCCATACTATGGCGCTGGTGTTGGTGGTCAGTTGAACATTACATCTCAAGGAAACCTTTATACTTGGGGTACTCCTTTTTCCCTGTGGCCAGCAATCAAACTTGCATATACTGTAACAAATAATGCTTCTGGCGGATCACAGAACTCTACTTCTTGGGCAAATAGAAACAGAATTATTTGTGAGCACTCAATTGTAAACTTTGTAGAAGGTGATAAGGTTGTATTCTTCTCCCAGTCAAACGTTCCTTCAGGTATCACTGAAACGAACAATAACTGGGATCAAAATATGAAGGATAGAATCTACTATGTAAGATTCCCTGCTATCAATACTGGTGTTTCCACAAACAACTTTGAATTCTCAGTATCCAGAACTCCAAATGGTCCTCTGGTTGATGTCACAGGATGGTCAAACACTGAGAACTCATTCGTTCTGAAAATTGAAGAACTAGCAACTTCAAACACTTGGTTCTCTACTCAGCATGGTTTTGATAATAACGAAGAAGGTGAACCAAACTACTGGTTGAAGTATCGTTTCGATGCTCAGAACTCCACTGGTAGTACTGTTGGTGGTATGACTGCTAACCATTGGTACTGGATGATTCCTGTTACTAATAATCACTTCAGAGTAACACTGGCATCTTCTTCTACCAGCAACACTCAGCCGTCCAGCACCAACCAAATTCCCCAGAAGAATGCTAGATCAAACATCATCAATATCACCAGTTTTAGCGGTGACGTAACTAACTTCCGCCACAAGTTTAGAGGCGAAGATATTGATAACCCATATGAGGATACCTTCTATATTCCCAACCATGGTTTCACATCAGGTACTGCAGTCAGGTACAATTCAAATGGAAACCCTTCAATTGGTGGTCTGCAAAATGGTACAACATATTATGTAAGAAATGCATCTACAGATAGATTTGAACTCACCACCACATTTGATGGTGTAAGACTCAACATGAGTTCTGGTTCTGCAACTAGTACACCAAACCACTACTTTGAAGATGTTTCACCTAAAGGTGCTATTGATGGTTCATTTGAGATTACTGCGAAGAATGCAGATAACCTCAGTTATGATCTGCAGGCAGATACTCAAATCTTTGGTAAGACTCTGACATTCCAACCTCAGAAATGTATTGACCTGAAGAGAGGAAAATTCAGAATCAATGATCACGGTCTCAAGACTGGTGTTTCAGTTGTTTACACTAAGGATGCTGCAGGTACTTCAATTGGTCAGAATCCACCACCTGATGCTGCACAGCAAGCAGCTGGTTACAATTCACTGACTTCAGGTGATACGTACTACGTCTATAGAGTTTCTAAGGACTACTTTGGTCTTGCAACCACTCTTGCCAATGCACAGGCAGGCACCATCATTACCGAATATTTCAACTTCGGTGATGCAGTCACTACAAACAGACAGCACACGCTGTATGCAAACAGTGTATTTGGTGAAGTCACTGGTAATGGTCTTCTGACTTATACCACGAAAGATAAGACTTGGGACGGTTCTTCAAACTCTAACGTCAATACCTACAGTAACTATCTTACTATCGGTACTCACGAATTCTATAACGGTGACGAAGTTGAGTATAACGGATTCGCTGGTGCAACACCTATTGTTGGTCTGGAATTCGGTCAGAAATACTTCATCCATAGATGGGGTAGTACTATCATCTCGTTCCACAAGACAAGATCAGATTCTTACAGAAGAAGAAATCAGATTAGAATATTTGGTCCTGGTACTGGATCACTTCACGTCGTTAGAATTGCAACCAACCTGCTGAAGGGTACAGTTGATAGAGGTAAGTGGAACTCTACTTCAGAATACTTTGCTGGAGACATTGTTCAGCACCCATATTCTTACCAAGGTCAAACTACTGATCTTTACTATGTTGCAACTCAAGACTCTCAGGGCAACTATGATGACTTGAGATATAACTATTCAAACGCAAATAACGTTGGTAGAACACCTCCTAATAGTGTTCGCGATGCATGGTGGAAGCGTCTGAATGATTACACTCAACCAGTATCAACTGGTGGTGGTCTTGAAACAAACATGATCAACCAGTATACTCCAGGTGAAAGCATCCTTATGGATGATGAGCGTTATGTTGGTTATGGTTATGGTTATGGTTATTATAATTACAACAGTGTTTCTAATGGTGGTACAACTGTATCAGTTCCTGGCAGCACCTATCACAACTTTGAAATTGGTGATGGTGTTTACTATCGTAATGAAGGTAAGTGGAGAGCACTTGAAGATGATATCGATTCAGGAAGCATCCCAACTGACTATTCTGGTCTTGTAGATGGTTCAATTTATTTTGTAAACACCATTAACTATTATCAGTTTACACTACACCAGAATCCAGAAGATGCAAGACAGGGTGTAAACCCAATTACTCTTGGACATAGTACTGGTAATAGTTCTTACTGGAGCCAACATAGATTCTATAAGACAGAATCCAGAGTTGTTTCTGCAAAGATTAGATCAATCTCTGATAGTGATGAGATGACGGTTGATGAACCACAGACACCTGCGGTTATCACATTTGACCCACAGGAAACTACTCCAATCACAGTTTGTGATATCACTACTGAGATCTTCTACTTCGGTACTACCGATGATGAAGGTAATGATATCACGGATCAAATGCTGACTGGTACTCGCGTTATCTATTCTCACGATGATAACTCTACTGCAATTGGTGGTTTGACTAAAGACGCTAACTACTTCTTGATCAACCTCGGTGATGGTTATTTCAGACTTGCTGGTAACGGCACTAATGATTACACCAGAAGACAGTATGCATACTCTGGCAATCGTACAAATATCACTAACACTGGTCAGGGTAACAAGCACTCAATCTCTATCTCGACTGAGAACTACAACAATGTTTCATACCTGCTGCCTACAGCACTGTATGTAAAACCATCTTCATATGCTCTGCATAGACCATTTGACGGTGGTGTTGAGATCAACCCAGGTACTTCTGCTGATTCTTCCGTTGTTAGACAGACCAGAAGATACTTCCGTTATCAGTCAGGTAAAGGTCTGCAGTACTCAACTGCTACCAACTACAATCCTCCAATTGAAGTAAGATCCTTGGTTGGTGGAACTGATGGAAATGGTGATCCAATTGCGACTGTTGTTACCAGAAGACCACACTATATGAATGTTGGTGATCATCTCTCAATGAGAGATACTTCAGTTGCAACTGGTACTAACCACTACAACACTGAAAACGGAGTTGTTGCTACCGTAACTGATGACTTTACGTTGACCTACACTCTTGCAGGAACACCATCTGATATTACTCCTGCTGGATTCCCAACACTGAACAAGAACTCCTGGACCAACTCCGTTGTTCGCGCTGGTATGTTTGATGACCAAAATGGATTCTTCTTTGAGTATGATGGTCAATATCTCTACGCTGTTAGAAGATCTTCTACTCAGCAATGTGCAGGTACAGTAACATGTACTTATGGTTCACAGATTGTAGATGGTAATGGCACAGTCTTTACTAAGCAACTTGCACCTGATGATTACGTTATAATTCGTGGTCAATCATATAAGATTGCATTCGTTGTTAGTGACACCAGACTTTATCTGACAAGAACTTATCAAGGTATCACCTCACCTCAGATCATCATGACGAAGACTGAGGATACCAAGACCCGTCAGTCCAATTTCAATATTGACAGATGTGATGGCAGTGGTCAGACAGGATTTGAAATGGATCTGAAGAAACTTCAGATGTGCTACATTGATTACTCCTGGTATGGTGGTGGTAAGATCCGCTACGGATTCAAAGATCAATTCGGTAAGGTCTTCTACGCTCATCAGTATGTACACAGTAACAAGTTTACTGAAGCATACTTCAGATCTGGTAACCTCCCAGCACGTTATGAAGTAGCGAACATTGGTGATAGAACTGGCACTGCTAGATTCTCACCATCACTGTTCCACTGGGGTGCATCGGTTATCATGGACGGTCTGTTTGAAGATGATAAGGCATATCTGTTCTCATCATCTACTGACACGATCTACCTGCTGAACCAGAAGTCAGACGGTGACGAAGATCAGGCAAACAGAGAGTATCCAATGCTTTCTCTGAGACTGGCACCTTCTGTTGACGCTGGTGTAACTGGTAATCTTGGTACTAGAGACTTGATCAACAGAATGCAACTTCAGATGAAGCAAGTCTCGATTACCATCTCTGACGGTGGTAATTCGGTTGACTCATTCACTAACAACCAAAACCAGGACCCTAGAAAGTCCTGTACTGTGAAACTTCTCCTGAATGCTGACTTGTCTCAACCTAATTGGGATGCAGTTCAAGCACCTTCACTCTCTGAAGTTATTCAGCACTCACACTCAACTGATACTGAATTCGCTAAACTTACTGATAGAACCAATGCTGGTATCAACATCTTCGAGTTTAGAGCAGCAGCAAACGACACTACAGTTGTAGAACTGGGTGATGTTGCAACTCTCGGTAACTCAATCCTTGGTGGAGACTATACCTTCCCCAACGGACCTGATACCCTGACAATTGTCGTCATTCCTGACGATTCCTACCAGTCGTCGTCTAGAAGATACACAATTTGTTCTGCTAGAATCTCCTGGTCTGAATCCCAGGCATGA

Tertiary structure

PDB ID
73de7eb56fd6c08836cfaf959e74040d38cf2ea28d9c615b73ef2ccbd845ae57
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6361
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50