Protein

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Genbank accession
AWD90711.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPRVQAGWARPIQGVSQQSDRDRINGQCTLQENMIPSVLDSLYKRIGTRHVARLPLSADRPYDDRTVIHFYDRGDDEKYFVFYEPDNATPFIFKTNGVACGVTITHASLDYCTESDPRANMSFSTIGDYTFIANGSQQVKARADVQPPNPANKAIVYVQFATYSRTYSVVVDGATYSYTTNGATTTAGPEDANLRASQIATNFVAAQLAAAMRVDGAFNVEQVANCLFITKSVGAINSITTIDGAGGQDLIAVQGRVKSPAFLPPYAPNGWLVLIQSSEGLQKNRYWLRAEGTDGSKVKWVESVEGGQRLGFNLNTMPHTLIRTGIVGGIPQFTQQAGEWVDRKVGNDDTVPFPSFTDGYVQSVGTFQNRLFFTSGESAVFTRSNDFFNFFKESSQTETDADPIDAFSDSEKINIIKNSLTVDGDAIFFADSGQFMVYGDKPVTAANVVFKQVTSFPMNIQAKPAITGESIMFAYDAGNYSGIREMFTDSDKDTKSARPITEHVEKYIEGRVRQLASNPNTNTLIVRADKNQHIAYVYDWLWQGADKVQAAWHKWTFDAGSKLLHVQFVDDDVFFILLHADGYVYLEHMPLTNDDPDDGMTFPCRLDRKVTVQATWDAAALVWRFATPFDIRVADFPNWRAVMASGCYSTDIGTAFSFERSLTDSTFYTPDMLQDPAVATTVNVVIGRKYLCRYIPTQPFLKDQNGNVMAIDRVTMGRMSVNYDRTGEFKVLVNDKMGRQWKYPFFGRVMGSFNNRIGFAPLISGTMPVPVRLFTHDATLEIQSDSHLPLQIRGLEWEGSYQQTGRRL
Physico‐chemical
properties
protein length:808 AA
molecular weight: 90119,17830 Da
isoelectric point:5,51920
aromaticity:0,11634
hydropathy:-0,29010

Domains

Domains [InterPro]
IPR058003
TTP
1–807
IPR058003
AWD90711.1
1 808
Architecture
TTP
TTP 1-807 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AWD90711.1
1 808
Domain Start End Length (AA) Confidence
N-terminal 1 137 137 0,9767
Central domain 138 336 200 0,1174
C-terminal 337 808 471 0,2743
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-137
Central
138-336
C-terminal
337-808

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Achelous
[NCBI] 		2163982 Uroviricota > Caudoviricetes > Autographivirales > Colwellvirinae > Nerthusvirus
Host Pseudomonas syringae pv. avii
[NCBI] 		663959 Pseudomonadota > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas > Pseudomonas syringae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AWD90711.1 [NCBI]
Genbank nucleotide accession
MH113814 [NCBI]
CDS location
range 26771 -> 29197
strand +
CDS
ATGCCTAGAGTACAAGCAGGGTGGGCACGTCCCATCCAAGGAGTATCGCAGCAGTCTGACCGCGACCGGATCAACGGCCAATGCACCTTGCAGGAGAACATGATCCCTTCGGTTCTTGATTCCCTGTACAAGCGCATCGGTACGCGCCACGTCGCCCGACTGCCCCTGAGTGCTGACCGTCCCTACGATGACCGCACCGTGATCCACTTCTACGACCGAGGCGACGATGAGAAATACTTCGTCTTCTATGAGCCAGACAATGCCACCCCTTTCATCTTCAAGACGAATGGAGTGGCTTGTGGGGTTACGATCACGCACGCATCGCTGGACTACTGCACCGAGTCCGACCCGAGAGCCAACATGTCGTTCAGTACCATCGGCGACTACACGTTCATCGCGAACGGCTCCCAGCAGGTCAAGGCCCGTGCAGACGTGCAGCCACCCAACCCGGCCAACAAGGCCATCGTGTATGTGCAGTTCGCAACCTACAGCCGGACGTACTCCGTGGTGGTTGACGGGGCGACCTACTCCTACACGACCAACGGTGCAACCACAACCGCTGGCCCCGAGGATGCCAACCTTCGCGCATCCCAGATCGCCACCAACTTTGTCGCAGCCCAACTGGCAGCAGCGATGCGGGTGGATGGGGCGTTCAACGTGGAGCAGGTTGCTAACTGTCTGTTCATCACGAAGTCGGTGGGTGCCATCAACAGCATCACCACCATCGACGGCGCGGGCGGTCAAGACCTGATCGCAGTGCAGGGCCGGGTTAAGTCTCCTGCCTTCCTGCCGCCTTACGCACCCAACGGCTGGCTCGTTCTGATCCAGAGTTCCGAGGGCTTGCAGAAGAACCGGTACTGGCTGCGCGCCGAGGGCACTGATGGTTCCAAGGTCAAGTGGGTGGAGTCGGTAGAGGGTGGGCAGCGTCTGGGCTTCAACCTAAACACGATGCCACACACCCTGATCCGCACTGGCATTGTCGGTGGTATCCCTCAGTTCACACAGCAGGCTGGTGAGTGGGTGGATCGGAAGGTGGGCAACGATGACACCGTGCCGTTCCCTTCCTTTACTGATGGCTACGTCCAATCCGTTGGCACGTTCCAGAACCGGCTGTTCTTCACCAGCGGCGAGTCGGCGGTGTTCACCCGCTCCAATGACTTCTTCAACTTCTTCAAGGAGTCGAGTCAGACAGAGACGGACGCTGACCCTATCGACGCATTCAGTGACAGCGAGAAGATCAACATCATCAAGAACTCCCTGACCGTGGATGGTGACGCCATCTTCTTTGCGGACAGCGGACAGTTCATGGTGTATGGCGACAAGCCGGTGACGGCAGCTAACGTGGTGTTCAAGCAGGTGACTTCGTTCCCGATGAACATTCAGGCCAAGCCAGCCATCACCGGTGAGTCGATCATGTTCGCGTATGACGCTGGCAACTACTCCGGCATTCGTGAGATGTTCACGGACTCGGACAAGGACACCAAGTCAGCGCGGCCAATCACCGAGCATGTCGAGAAGTACATCGAGGGCCGGGTGCGCCAACTGGCGAGCAACCCGAACACCAACACGTTGATCGTGCGTGCAGATAAGAACCAGCACATCGCATACGTCTATGACTGGCTGTGGCAGGGCGCCGACAAGGTGCAGGCTGCGTGGCACAAGTGGACGTTCGATGCTGGCTCCAAGCTGCTGCACGTTCAGTTCGTGGATGACGATGTGTTCTTCATCCTGCTGCATGCTGACGGGTACGTTTACCTTGAGCATATGCCGCTGACGAACGACGACCCAGACGATGGTATGACGTTCCCGTGCCGACTGGATCGCAAGGTCACAGTGCAGGCAACATGGGACGCAGCCGCTCTGGTGTGGCGCTTCGCAACTCCGTTCGACATCCGTGTGGCTGACTTCCCCAACTGGCGGGCGGTCATGGCATCCGGGTGCTACAGCACGGACATCGGTACAGCGTTCTCCTTTGAGCGCAGCCTGACTGACAGCACGTTCTACACACCGGACATGCTGCAAGACCCAGCGGTGGCAACCACCGTCAATGTGGTCATCGGTCGCAAGTACCTGTGCCGGTACATCCCAACGCAGCCCTTCCTCAAAGACCAGAACGGAAACGTCATGGCGATTGACCGGGTGACGATGGGGCGCATGTCTGTCAACTACGACCGCACCGGTGAGTTCAAGGTGCTGGTTAATGACAAGATGGGCCGGCAGTGGAAGTACCCATTCTTTGGGCGTGTCATGGGCAGCTTCAATAACCGGATTGGTTTCGCCCCGCTCATCAGCGGTACGATGCCTGTGCCGGTGCGGCTGTTCACCCACGACGCCACGCTCGAAATTCAATCCGATAGCCACCTGCCTCTCCAGATCCGTGGGTTGGAGTGGGAGGGCAGCTATCAGCAGACAGGCCGGAGGTTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d833ed636f025eb0c95ca7c09eab8ea9a20f6b9a244e70f464d645d2437acde3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9102
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage therapy in agriculture - a green tech approach to combat plant pathogenic bacteria Djurhuus,A.M., Carstens,A.B. and Hansen,L.H. 1991 — GenBank