Protein

View in Explore
Genbank accession
XPO96505.1 [GenBank]
Protein name
membrane protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGEGIYVNYNDGRPAMQITAGLRAPSFCANFNQRAQSNKTLTINTPLTPGSQVVVVFTNPVDVIEVFDQTLVIPDPFYVTTVSRNGNNGVIIRGEDALSAYTGLPQWAGTVMEILPVGTRNEGLLVANSTDFTAISNVAKLMTCQYSNRITVNGNMKLPVGGIPFARWDNPNVSVGFDGSNITVRNTSYGGTDDVTASVTMDLVIFNNTPPRGGNGITMTNKQGQVTFSTVNKPFVYNRVINIGTGDQDIGNSLIQLSYCGALIESNGGYNHVRMNGIRMAGNKIRVAKNKVVGNYSRQQFVMPNRNIAIQSPLIVLPNMY
Physico‐chemical
properties
protein length:321 AA
molecular weight: 34741,07650 Da
isoelectric point:9,13087
aromaticity:0,07788
hydropathy:-0,10717

Domains

Domains [InterPro]
IPR045604
STR
4–297
IPR045604
XPO96505.1
1 321
Architecture
STR
STR 4-297 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPO96505.1
1 321
Domain Start End Length (AA) Confidence
N-terminal 1 117 117 0,1751
Central domain 118 310 194 0,0024
C-terminal 311 321 10 0,9951
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-117
Central
118-310
C-terminal
311-321

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EF3-1
[NCBI] 		3385241 Viruses >
Host Escherichia fergusonii
[NCBI] 		564 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPO96505.1 [NCBI]
Genbank nucleotide accession
PQ571291 [NCBI]
CDS location
range 12670 -> 13635
strand -
CDS
ATGGGAGAGGGGATATACGTAAACTACAATGACGGTCGTCCTGCGATGCAAATAACGGCAGGACTTCGCGCTCCGTCATTCTGCGCCAACTTCAACCAGAGGGCGCAATCAAATAAGACGCTGACTATAAATACTCCATTGACGCCGGGATCTCAGGTTGTTGTTGTCTTTACGAATCCTGTTGACGTTATTGAGGTGTTCGACCAGACACTTGTCATACCCGATCCGTTTTATGTTACTACTGTGTCAAGAAACGGCAATAATGGAGTGATAATCAGAGGTGAGGATGCATTGAGTGCATATACCGGACTTCCTCAATGGGCAGGTACTGTCATGGAGATATTACCAGTCGGCACAAGAAATGAGGGTCTACTTGTTGCAAACTCGACTGACTTCACAGCTATATCAAACGTGGCAAAATTAATGACGTGCCAATATTCAAATCGAATAACTGTTAATGGAAACATGAAATTGCCAGTTGGAGGGATACCATTCGCAAGATGGGATAATCCTAATGTGAGCGTTGGATTTGACGGCTCAAACATCACCGTAAGAAATACATCTTACGGCGGTACGGATGACGTTACGGCTTCTGTTACTATGGATTTGGTGATATTCAATAACACTCCACCGCGTGGCGGTAACGGTATAACTATGACCAACAAGCAAGGTCAGGTTACTTTTTCTACAGTAAATAAGCCATTCGTTTACAACCGCGTAATCAATATCGGCACAGGGGATCAGGATATAGGGAACAGCCTTATTCAGCTATCATACTGCGGCGCTTTGATTGAAAGCAATGGGGGATACAACCACGTAAGGATGAACGGGATCAGAATGGCAGGTAACAAAATAAGAGTCGCTAAAAACAAGGTTGTTGGCAACTACTCTCGACAGCAATTCGTGATGCCTAACAGGAACATAGCAATTCAATCTCCGTTGATAGTTCTTCCAAACATGTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
034c7b7337b243b727cf07e9def3829cb37901afb0b7bb3d5de7c5f02b33272f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7957
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50