Protein

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Genbank accession
UFZ20879.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSGTLTKFPTGSTQYKINFDYLSRKFVKVTLSNSLDATLNKELVVGNDYRFLSATTLEILASQSGFDVIQIYRQTSSELMVDFRDGSVLTSSDLTTAELQAIHIAEEGRDQTVEQAVQFAEAAEKSAEDAAASLSGIKDIIANNNIDSTIRSDLSKSDGYTMIGGLSERFSLPYKWVVVDNAPYNGDLEKAVSESSDGTGFLLGIGKSYDFLTFRNARNTKKNLTFVGGGVPELSADTRSLVAGTGTIIRGPMKTEAGGFQLVNLGVDCGGVVSDELLGGQWDDPIQCYGIGKEANVFIDNVKTLSHTNLTGPNYPGTHSLLLEILDGAYVGKVELIGGYHGLTLKGTNLDVMDAHCYGQRGDAFIIKSDSAAPAADIYVGRLKVGLRDNSKFTDVTMGGIYDAHDGVNIDNVEIGSLQVYNASWGLIPSNENTGYISNLRIGNYVAMNVYGNYYSLVIDGRCVGVNIGEHQCSNTSGGISIDPSSVNVSLGNGFSKCATKSGYKLGGNSLVHGNLIADENGEYGVDYVGGLGFDASKVLGYSNQFGLVATEVSALGSTTGPKNGWGDTGDFSWVMHGKMSIVNGALIKGAGAVPYTSLPITAPRRRTRIAAWGVQGSSMIPVECYVEANGDLNVVGWESITDGNVINFSGQYLAK
Physico‐chemical
properties
protein length:656 AA
molecular weight: 69726,12580 Da
isoelectric point:4,86050
aromaticity:0,08537
hydropathy:-0,10488

Domains

Domains [InterPro]
DC_1263
ATT
1–197
DC_1263
IPR005604
ATT
12–114
IPR005604 DC_0478
UFZ20879.1
1 656
Architecture
ATT
STR
ATT 1-197 | STR 198-656
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UFZ20879.1
1 656
Domain Start End Length (AA) Confidence
N-terminal 1 185 185 0,9949
Central domain 186 545 361 0,9907
C-terminal 546 656 110 0,9892
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-185
Central
186-545
C-terminal
546-656

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage PRF-SP3
[NCBI] 		2900272 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella paratyphi
[NCBI] 		54388 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UFZ20879.1 [NCBI]
Genbank nucleotide accession
OL539729.2 [NCBI]
CDS location
range 33573 -> 35543
strand +
CDS
ATGTCCGGAACTCTTACTAAATTCCCAACTGGAAGCACACAATATAAGATTAACTTCGACTACTTATCCCGTAAGTTTGTTAAAGTTACTTTAAGCAACTCTCTTGATGCTACCTTAAATAAAGAGCTAGTGGTTGGTAACGATTACCGCTTCCTTAGTGCAACCACATTAGAAATACTAGCCAGTCAATCTGGGTTCGACGTCATACAGATTTATCGCCAAACGTCTTCAGAGCTTATGGTTGATTTCAGAGATGGCTCAGTATTGACCTCATCCGACCTCACAACGGCTGAGCTTCAGGCCATCCATATCGCCGAGGAGGGCAGAGACCAGACGGTTGAACAGGCCGTGCAGTTTGCGGAAGCTGCTGAGAAATCTGCCGAGGACGCTGCCGCATCACTTAGCGGGATTAAGGACATAATCGCTAACAACAATATCGATTCAACAATCCGTTCAGACCTGTCCAAGTCGGATGGATACACAATGATTGGCGGACTGTCTGAACGATTCAGTCTACCCTACAAGTGGGTGGTAGTGGATAACGCTCCTTATAATGGCGACCTTGAGAAGGCCGTATCCGAAAGTTCAGACGGTACGGGATTCCTATTAGGTATAGGGAAATCCTACGACTTCCTTACATTCCGCAACGCTCGTAACACTAAGAAGAACCTAACGTTCGTTGGTGGAGGGGTCCCGGAGCTGTCTGCCGATACACGGAGCCTTGTTGCTGGTACTGGAACGATAATCAGAGGACCAATGAAGACTGAGGCTGGTGGGTTCCAGTTAGTGAATCTAGGCGTTGACTGTGGTGGCGTGGTGTCAGACGAACTTCTAGGCGGTCAATGGGACGACCCTATCCAGTGCTATGGTATTGGTAAAGAGGCAAATGTTTTTATAGATAACGTTAAAACCCTGAGCCATACAAACCTCACTGGTCCAAACTACCCAGGAACTCACAGCTTGCTTCTTGAGATTCTTGACGGAGCTTATGTTGGAAAGGTAGAACTGATTGGCGGCTACCACGGTCTGACCCTTAAGGGGACTAACTTAGATGTGATGGACGCCCACTGTTACGGACAAAGAGGCGATGCGTTTATTATTAAGTCTGACTCTGCTGCGCCGGCTGCTGATATCTACGTCGGAAGACTTAAGGTAGGGCTTCGTGATAACTCTAAGTTTACAGATGTTACTATGGGCGGCATCTACGACGCTCACGATGGGGTTAACATAGATAACGTGGAGATAGGCTCTCTTCAGGTCTACAACGCATCATGGGGGCTCATTCCCTCAAATGAAAATACTGGTTATATCAGCAACTTGCGTATTGGGAACTACGTGGCTATGAACGTATATGGTAACTACTATTCGCTAGTGATTGATGGTCGCTGCGTTGGTGTTAACATAGGGGAGCACCAGTGTTCTAATACATCTGGCGGAATCAGCATAGACCCTTCCTCTGTTAACGTGTCATTGGGTAACGGATTCTCAAAGTGTGCCACAAAGTCTGGTTACAAGCTGGGTGGTAACTCTCTGGTTCACGGGAACCTGATAGCCGATGAGAATGGTGAGTACGGTGTTGATTATGTTGGTGGCCTAGGGTTCGATGCATCAAAAGTTCTAGGGTATAGTAACCAATTCGGTCTGGTGGCGACTGAGGTTAGCGCCCTTGGGTCAACTACTGGACCTAAGAATGGATGGGGAGACACCGGGGACTTTTCATGGGTAATGCATGGCAAGATGTCGATAGTAAACGGAGCCCTTATTAAGGGAGCTGGGGCTGTTCCATACACATCCCTACCAATAACGGCGCCTCGCAGGAGAACGCGCATCGCTGCATGGGGTGTGCAAGGGTCGAGCATGATTCCAGTCGAGTGCTATGTGGAAGCGAATGGGGACCTTAACGTCGTTGGCTGGGAGTCCATTACAGACGGAAACGTGATAAACTTCTCCGGTCAGTACCTAGCTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cab86311977b0e4c8d0a15ca33418cc6651fe03cb4a4a2847d9b23d68483f52c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8048
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50