Protein

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Genbank accession
XOD31685.1 [GenBank]
Protein name
highly immunogenic outer capsid protein
RBP type
TF
Evidence RBPdetect2
Probability 0,65
Protein sequence
MTFTVDITPKTPTGVIDETKQFTATPSGQTEGGTITYAWSVDNVPQDGAEATFSYVLKGPAGQKTIKVVATNTVPESEPETAETTTTITVQNKTQTTTLAVTPGSPDAGVIGTPIEFTAALASQPSGANATYQWHVDGSPVDEATDATFNYTPDTSGVKKIKCVAQVTAADYDAKTVTSNEVSLTVNKKTQTTTLAVTPDSPAAGVIGTAVEFTAALASQPDGASATYQWYVDGSLVDGETTTTFNYTPTTVGAKTVKCVAQVTAENYNEKEVTSNEVSLTVNKKTMNPQVTLTPPSINVQQDASATFTANVTGAPEAAQITYSWKKDSSPVEGSTNVYTVDTSSIGSQTIEVTAVVTATDYDSKTVKATGQVQVTDKVAPEPEGELPYFHPLPHRTSAYIWCGWWVMDEIQKMTEEGKDWKTDDPDIKYYLHRYTLQKMIKDYPEVDVQESRNGYIIHKTALETGIIYTYP
Physico‐chemical
properties
protein length:472 AA
molecular weight: 50691,45660 Da
isoelectric point:4,55106
aromaticity:0,08051
hydropathy:-0,39195

Taxonomy

Phage
Shigella phage sb1 [NCBI] · taxon 3387546
Viruses
Host
Shigella flexneri [NCBI] · taxon 623
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
XOD31685.1 [NCBI]
Genbank nucleotide accession
PQ666539 [NCBI]
CDS location
range 111349 -> 112767
strand -
CDS
ATGACTTTTACAGTTGATATAACTCCTAAAACCCCAACAGGAGTTATTGATGAAACCAAGCAGTTTACTGCTACACCCAGTGGTCAAACTGAAGGTGGAACTATTACCTATGCTTGGAGTGTAGATAATGTTCCACAGGATGGAGCTGAAGCAACTTTTAGCTATGTACTAAAAGGACCTGCAGGTCAAAAGACTATTAAAGTAGTTGCAACAAATACAGTTCCAGAATCTGAACCTGAAACAGCAGAAACTACGACAACTATCACAGTTCAAAATAAGACACAAACAACTACTTTAGCTGTAACTCCTGGTAGCCCTGATGCTGGAGTGATTGGAACTCCAATTGAATTTACCGCTGCCTTAGCTTCACAGCCATCAGGTGCAAACGCTACGTATCAATGGCACGTTGACGGTTCTCCTGTAGACGAAGCAACTGACGCTACATTCAATTACACTCCTGACACAAGCGGAGTAAAAAAAATCAAATGCGTAGCCCAAGTAACAGCAGCAGATTATGACGCAAAAACAGTTACTTCTAATGAAGTATCATTAACAGTTAATAAAAAGACGCAGACGACTACCTTGGCAGTAACTCCTGATAGTCCTGCTGCCGGGGTAATTGGAACAGCCGTTGAATTTACTGCTGCCTTAGCTTCTCAACCTGATGGGGCATCTGCTACGTATCAGTGGTATGTTGACGGTTCTCTGGTCGATGGAGAAACTACTACTACATTTAACTATACTCCTACCACAGTTGGAGCTAAAACAGTTAAGTGTGTAGCGCAAGTAACTGCAGAAAATTACAATGAAAAGGAAGTTACTTCTAATGAAGTATCATTGACAGTTAATAAGAAGACAATGAATCCACAGGTTACATTGACTCCTCCTTCTATTAACGTTCAGCAAGATGCTTCGGCTACATTTACGGCTAATGTTACTGGAGCACCTGAAGCAGCACAAATTACTTATTCATGGAAGAAAGATTCTTCTCCTGTAGAAGGGTCAACTAATGTATACACCGTTGATACATCATCTATTGGAAGTCAAACTATTGAAGTTACTGCTGTCGTTACAGCAACCGACTATGATAGTAAAACAGTTAAAGCAACAGGCCAAGTTCAGGTAACTGATAAAGTTGCTCCGGAACCAGAAGGTGAATTGCCTTATTTTCATCCTCTTCCACATCGTACTTCGGCTTATATCTGGTGCGGTTGGTGGGTTATGGATGAAATCCAAAAAATGACCGAAGAAGGTAAAGATTGGAAAACTGACGACCCAGATATTAAGTATTACTTGCATCGTTACACTCTTCAGAAGATGATAAAAGACTATCCAGAAGTCGATGTTCAAGAATCGCGCAATGGATACATCATTCATAAAACTGCTTTAGAAACTGGTATCATCTATACCTATCCATAA

Genome Context

Tertiary structure

XOD31685.1
ESMFold structure
Source ESMFold
pLDDT 81.1
Oligomeric state monomer
Download structure