Protein

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Genbank accession
CAB4148271.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAITCFPFDGTGDGSVVTEGQWASMARLWSSDGVVPGYLNELAVSNFATNSFSVTVGTGSAWVGGHYISNSSSVTVNVDATGSHIWPDTVNSGNVLAIFAVVIQLDWQLNQVTFRLMRGGSQPSTGAAALYPPALVRVPEVLWQFPLAYFFADTSYSSGISQTTVDYLSQSWPVNATKLLSATTNTPNKIVDTRIYLPTYAPHYTSYANVDSIAASGASAANFQMSNGGIVLRKSGVPNSPGTGSLILYAKSDNTLAFKVNASTTEYVVLTGGQSTIGSTGATGPTGPTGATGITGATGTNVSSVSLITSDPVNLTTYGTATSALSASGVLSLTLPKGLTGSQGLTGATGLTGITGATSVIPGATGETGVTGATGLQGSPGPAASVGATGITGATGATGFTGATGPTGATGIIGSTGATGPTGLTGPTGATGLTGATSTVVGPTGITGATGTTGATGADSTVPGATGITGATGLMGYTGADSTVPGPTGATGITGATGADSTVAGPSGPSGPSGPIGLTGPQGPQGTTGSAGVATFARTLLLMGI
Physico‐chemical
properties
protein length:545 AA
molecular weight: 52831,90460 Da
isoelectric point:4,75654
aromaticity:0,06239
hydropathy:0,19303

Domains

Domains [InterPro]
IPR050149
277–531
IPR050149
IPR008160
387–435
IPR008160
CAB4148271.1
1 545
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4148271.1 [NCBI]
Genbank nucleotide accession
LR796496 [NCBI]
CDS location
range 9452 -> 11089
strand +
CDS
ATGGCTATAACATGTTTTCCATTTGATGGAACTGGAGACGGTTCTGTAGTAACTGAAGGACAGTGGGCTTCTATGGCTAGACTTTGGTCTAGTGATGGAGTTGTCCCCGGATACCTCAATGAATTAGCAGTTTCTAATTTCGCTACTAATTCTTTTTCAGTTACTGTCGGAACAGGATCGGCATGGGTAGGCGGACATTACATATCTAATTCTTCTTCAGTCACCGTAAATGTTGATGCTACTGGATCGCACATTTGGCCCGACACAGTAAATTCAGGAAATGTTCTTGCTATTTTTGCAGTTGTCATTCAGTTAGATTGGCAACTTAATCAGGTAACTTTCAGGTTAATGCGTGGTGGATCGCAACCGAGTACAGGAGCGGCCGCGCTGTATCCTCCCGCGCTGGTAAGAGTACCAGAAGTTTTGTGGCAGTTTCCTTTAGCGTATTTTTTTGCTGACACTTCGTATAGTAGCGGTATTAGTCAAACTACAGTCGATTACTTGTCGCAATCTTGGCCCGTAAATGCCACTAAATTGCTTTCTGCAACCACCAATACTCCAAATAAAATCGTAGACACAAGAATTTATCTCCCTACTTACGCGCCACATTACACCTCATACGCAAACGTCGATTCTATTGCTGCTTCTGGCGCAAGTGCTGCTAATTTCCAGATGAGTAATGGCGGAATTGTACTCAGAAAAAGTGGCGTTCCTAACTCTCCCGGTACAGGAAGTCTTATTTTATACGCAAAAAGTGACAACACTCTTGCGTTTAAGGTAAATGCTAGTACGACTGAATACGTTGTTCTTACAGGTGGTCAAAGTACAATCGGTTCCACTGGTGCGACCGGCCCAACCGGCCCAACTGGCGCTACGGGAATAACCGGCGCTACTGGAACTAATGTCTCTTCTGTAAGTCTTATTACATCCGATCCAGTAAATTTAACTACTTACGGAACTGCAACAAGTGCGCTTAGTGCTTCTGGTGTACTCTCACTTACGCTTCCTAAAGGCTTGACAGGTTCTCAGGGATTGACCGGCGCGACTGGCCTTACGGGAATCACTGGCGCTACTTCTGTAATTCCCGGCGCGACTGGCGAAACTGGCGTAACTGGCGCAACTGGATTACAAGGTTCTCCCGGCCCTGCGGCAAGCGTTGGAGCGACAGGAATCACTGGCGCTACCGGAGCAACTGGTTTTACCGGAGCAACTGGCCCTACCGGCGCTACGGGAATAATCGGTTCCACTGGAGCAACTGGCCCAACGGGACTAACTGGCCCTACCGGCGCTACTGGTTTGACAGGTGCCACTTCGACAGTTGTTGGCCCGACAGGGATTACCGGCGCTACTGGAACAACCGGCGCTACTGGTGCGGATTCAACAGTTCCCGGCGCTACAGGAATAACCGGCGCTACTGGTTTGATGGGGTACACTGGCGCGGACTCAACAGTTCCCGGCCCAACCGGCGCTACGGGAATAACCGGCGCTACTGGCGCGGATTCAACAGTTGCTGGCCCGTCTGGCCCGTCTGGCCCGTCTGGCCCAATTGGTTTGACTGGCCCGCAAGGCCCGCAAGGCACGACTGGTTCAGCAGGTGTCGCTACTTTTGCGCGAACTCTTCTTTTGATGGGAATATAA

Tertiary structure

PDB ID
d3279c09c0718606cbf838b9c6d77c471e2cd8457f2f61bcc11395632ff3ce72
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5813
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50