Protein

View in Explore
Genbank accession
CEF89773.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSQRYSPSIPPQEEEELLPFLNEEFVRVGQTLNDVADGYWGVSMEPPKKLKPGTVKYFAPGVVGPVSGIYYYDLDNQWKLAGTKPKDLPGDFILFTPANNHQAMGTCAYRMNTDKDEVWITLLASGGNYTDGATVLDLPQAYWPPAELFIPAFSSIIPAQSQITYPPPSDPNAPPLDQVFDVLNRATIQTAVVNQAMFKLTANGRLLIQGIPQGAIFGGTFTYPLVVTP
Physico‐chemical
properties
protein length:229 AA
molecular weight: 25113,27910 Da
isoelectric point:4,56471
aromaticity:0,11354
hydropathy:-0,15415

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeP_C2-10_Ab22
[NCBI] 		1548906 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CEF89773.1 [NCBI]
Genbank nucleotide accession
LN610578.1 [NCBI]
CDS location
range 33815 -> 34504
strand -
CDS
ATGAGTCAAAGGTACAGCCCCTCGATTCCGCCACAGGAAGAGGAGGAACTGCTGCCCTTCCTTAATGAGGAATTCGTTAGGGTTGGACAGACTCTCAATGATGTGGCTGATGGCTATTGGGGGGTCTCTATGGAGCCCCCTAAGAAGCTTAAGCCAGGAACGGTTAAGTATTTTGCCCCTGGGGTAGTAGGTCCTGTATCAGGTATCTATTATTATGACTTGGATAACCAGTGGAAACTCGCCGGTACTAAACCCAAGGATCTCCCAGGGGATTTTATCCTATTCACCCCTGCTAATAATCATCAGGCTATGGGCACCTGTGCATACCGGATGAATACAGACAAGGATGAAGTGTGGATTACCCTTCTGGCATCCGGAGGGAATTATACTGACGGTGCTACAGTGTTGGACCTTCCCCAAGCCTATTGGCCTCCTGCGGAACTGTTCATCCCAGCATTTTCCAGTATCATTCCAGCCCAAAGCCAGATCACTTATCCACCACCCTCAGACCCAAATGCACCCCCTCTGGATCAAGTCTTTGATGTTCTTAATCGGGCTACAATCCAAACTGCTGTGGTCAACCAAGCAATGTTTAAGCTTACGGCTAATGGTCGTCTGCTTATCCAAGGAATTCCCCAAGGTGCTATCTTCGGGGGTACGTTTACTTATCCCCTAGTGGTGACTCCATGA

Tertiary structure

PDB ID
42c36667a5d972f88fa66f06b283b731be81f87fc487d0ee74dbbbb606fef32f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7466
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50