Protein

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Genbank accession
CAB4194601.1 [GenBank]
Protein name
Phage tail collar domain containing protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,74
TF
Evidence Phold
Probability 1,00
Protein sequence
MDLVNRGVISSASNTGGHSHTLSDVADAFVDNPREGDVLTYSDNKWIASYSPPTGSIMMWPTNSEPTGWLFCEGQEVAIDKYEDLYKILLTTYGIITNGAGTGTAGTTHFQLPDLRSRVPIGAGQGYGTVYNANATTTTQGNLTTRTLGTSYGMEGTKLIASMHLAHDHGSSGAHQHIAVYYETSGGANDYNNDDGVNFGVDTQTGVQGPMNITTSAGGGSHTHTAFGTALAAGQVAVPIIPPALALNFIIKI
Physico‐chemical
properties
protein length:253 AA
molecular weight: 26485,93040 Da
isoelectric point:5,13827
aromaticity:0,07905
hydropathy:-0,19051

Domains

Domains [InterPro]
IPR037053
44–116
IPR037053
SSF88874
49–253
SSF88874
IPR011083
55–120
IPR011083
CAB4194601.1
1 253
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4194601.1 [NCBI]
Genbank nucleotide accession
LR797213 [NCBI]
CDS location
range 46013 -> 46774
strand +
CDS
ATGGATCTAGTAAACCGTGGAGTCATTAGTTCGGCTAGCAATACAGGTGGGCATAGTCACACACTTAGTGATGTTGCCGATGCTTTTGTTGATAATCCTCGCGAAGGCGATGTTTTAACTTACAGTGACAATAAATGGATAGCATCATACTCACCACCTACAGGTAGCATTATGATGTGGCCAACAAATAGCGAACCTACAGGATGGTTGTTCTGTGAAGGCCAAGAAGTCGCTATTGATAAATATGAAGATTTGTACAAAATACTTTTAACAACTTACGGAATCATTACTAACGGTGCCGGCACAGGAACTGCAGGAACAACACATTTTCAATTACCAGATTTGAGAAGCAGAGTTCCAATTGGAGCAGGACAGGGTTATGGAACCGTTTACAACGCTAACGCAACGACAACAACACAAGGCAACTTAACTACACGAACATTAGGTACGTCTTATGGCATGGAAGGCACTAAATTAATTGCATCAATGCATCTGGCTCATGATCATGGTAGCTCAGGAGCCCATCAACATATCGCTGTATATTATGAAACTTCTGGCGGCGCTAACGACTACAACAATGACGACGGCGTTAACTTTGGCGTTGATACTCAAACTGGAGTCCAAGGCCCGATGAATATTACAACATCCGCTGGTGGAGGATCACACACCCACACTGCTTTTGGAACGGCATTAGCTGCAGGGCAAGTAGCAGTGCCAATCATTCCACCAGCATTGGCACTAAACTTTATTATCAAAATTTAA

Tertiary structure

PDB ID
4b048f476bd2484935810912907b2c6a1b162968b4dffa2a8a49558e722e8135
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7072
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50