Protein

View in Explore
Genbank accession
XYR95259.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MALTKATMVGTDLIQYLRVPTLSALRLRKPSYPGEIVIVERATPTSGRVDAKFIHDPDDTTSVDDDFSIITTSNGSRWKCDISDGYDVRLAGIGIDGSGFSAAMNKAVGTIIQRIVSNGRVNNVVRSMKVVPTNFICEFKVTDPVDIPSFVSCGFVGAPYLECKDMTGLYAIRIANQPFSVSGLTKAMMQSNTSWPSGPLNQAIGNKVIFAKDGNRITLRGPGFADGILRKGIILGNDLATDLDVRDCSVEDVNVFGFYASHTLGGNFTFMAGFRNCNFSRCNIGNYVPSIVGNAGERMWYDSCTFGNISSHAMQYFSAGTYTLINTSIDFIGGDMFHFGPECATSIEFLSGHIEGIQGQDAAKDTPTNYSQARVHIHSAVLRDPRQGGGVYRGIRQRFGCPSSAFGQGLAVIDESISPGMENTKPNTEYPCLTGYPGNTGVFIETPRTANRGTPWLNSYSAACSKRINSTLSFTELSTGALGANLLSTDYAFAQEVVGGGTIEYGTLADASADGYMPFKITLSSPTDSVTLFCTNRARFPTGLKPLWAAASVKLGDSIGDITIQPAAASYMGAGITSVYNDTTKTVVSTLNPVRRGTTYGVPLNLRELLNGSGLTTSQFQATYPRSVSGWFQGNDFFVPGFRVTGGTGTIYLKLPVWWFEGENFGA
Physico‐chemical
properties
protein length:667 AA
molecular weight: 71656,04170 Da
isoelectric point:6,41345
aromaticity:0,10195
hydropathy:-0,07316

Domains

Domains [InterPro]
IPR059934
RBD
18–79
IPR059934
DC_1149
STR
50–667
DC_1149
XYR95259.1
1 667
Architecture
RBD
STR
RBD 18-49 | STR 50-667
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYR95259.1
1 667
Domain Start End Length (AA) Confidence
N-terminal 1 101 101 0,9898
Central domain 102 454 354 0,9905
C-terminal 455 667 212 0,9954
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-101
Central
102-454
C-terminal
455-667

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage S16a
[NCBI] 		3410968 No lineage information
Host Klebsiella pneumoniae S16
[NCBI] 		2904666 Ascomycota > Dothideomycetes > Pleosporales > Cucurbitariaceae > Parafenestella >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYR95259.1 [NCBI]
Genbank nucleotide accession
PV239575.1 [NCBI]
CDS location
range 12756 -> 14759
strand +
CDS
ATGGCTTTAACTAAAGCTACCATGGTAGGGACAGACCTCATACAATACTTAAGAGTTCCAACACTCTCTGCATTGAGACTAAGGAAGCCATCTTATCCTGGTGAGATAGTCATAGTAGAGAGGGCAACCCCAACATCTGGTCGTGTTGATGCAAAGTTTATACACGACCCCGATGACACCACTAGTGTTGATGATGACTTTTCCATCATAACCACAAGCAATGGTAGTCGTTGGAAGTGTGACATCTCGGACGGCTATGATGTAAGGCTTGCAGGTATTGGTATTGATGGCTCTGGCTTCTCCGCTGCTATGAATAAGGCTGTTGGCACCATCATACAGCGTATTGTGTCTAATGGTCGGGTTAACAATGTGGTTCGCTCAATGAAGGTTGTACCAACAAACTTTATTTGTGAATTCAAGGTTACAGACCCTGTTGACATACCATCCTTCGTAAGCTGTGGGTTTGTTGGCGCGCCGTACCTTGAGTGCAAAGACATGACCGGGCTTTACGCCATACGAATTGCGAACCAGCCATTTAGCGTTTCTGGTCTGACGAAGGCAATGATGCAATCTAACACATCTTGGCCGTCTGGTCCACTTAACCAAGCAATTGGTAACAAGGTAATATTCGCCAAGGATGGTAACAGGATTACCCTCCGGGGACCTGGGTTCGCAGATGGTATCTTGCGTAAGGGTATCATATTAGGTAATGACCTTGCGACAGACCTTGATGTTCGTGATTGCAGTGTTGAAGATGTCAACGTCTTCGGCTTCTACGCATCTCATACCCTCGGTGGCAACTTCACGTTTATGGCCGGTTTCCGAAACTGCAACTTCTCAAGGTGCAATATAGGTAACTATGTGCCTAGTATCGTTGGTAACGCAGGCGAAAGGATGTGGTATGATTCCTGCACCTTTGGTAACATATCCAGCCATGCTATGCAATACTTCAGTGCAGGTACTTATACCCTCATCAATACCTCTATTGACTTTATCGGTGGGGACATGTTCCACTTTGGACCCGAGTGTGCAACATCTATCGAGTTCTTATCGGGTCACATCGAAGGTATCCAAGGTCAAGATGCAGCGAAAGATACCCCTACCAACTACTCTCAGGCACGTGTGCACATTCACTCTGCTGTGTTACGCGACCCACGTCAAGGTGGTGGTGTTTATCGTGGCATAAGACAGCGCTTTGGTTGCCCGTCCTCTGCCTTTGGGCAAGGTTTGGCTGTAATTGATGAGTCTATCTCTCCAGGCATGGAGAACACCAAGCCAAACACAGAGTACCCCTGCCTCACCGGGTATCCAGGCAATACTGGTGTGTTCATTGAGACGCCACGTACAGCGAACCGAGGCACGCCTTGGCTGAACAGCTACAGTGCAGCCTGCTCTAAACGCATCAACTCCACACTGAGCTTCACGGAGTTATCCACTGGAGCCTTGGGCGCAAACCTTCTGTCTACAGACTACGCCTTTGCGCAGGAAGTGGTTGGTGGTGGTACAATCGAGTATGGCACTTTAGCAGATGCGTCTGCTGATGGTTACATGCCATTTAAGATAACACTCAGTTCTCCAACAGACTCTGTTACCTTGTTCTGTACAAACAGGGCAAGATTCCCTACTGGCCTCAAGCCACTATGGGCTGCTGCCTCTGTTAAGCTGGGTGACTCTATTGGTGATATAACGATACAGCCAGCCGCTGCAAGTTATATGGGTGCGGGTATCACCTCGGTGTACAACGATACAACCAAGACAGTTGTAAGTACACTCAACCCAGTACGAAGGGGAACCACCTATGGTGTGCCTCTCAACTTACGGGAGCTGCTGAATGGCTCTGGCCTGACAACTAGTCAATTCCAAGCAACCTACCCTCGCAGTGTAAGTGGGTGGTTCCAAGGTAATGACTTCTTTGTCCCTGGGTTCCGTGTTACTGGTGGCACTGGTACAATCTACCTTAAGCTCCCTGTGTGGTGGTTTGAGGGTGAGAACTTCGGGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
68a6a417e21deaa3c4e6f8b7a9997827f4a829cd8539d59c48da9aedc7744c43
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7373
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50