Protein

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Genbank accession
AIM50567.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MQVSLGSVDGVKVTFQCIDVQQQLSEASSAADRAEAAAESIESQSANIESNSREQWRRSLADAGITLVNGSFEAGATVSNASEAVWHIAGGQCYTWGGVMPKVVTEGSTPSETGGVSPGAWTSVGNKSFSQILASNKGMNLIGDVDSVAQLASVSGASVGDKILVRSYIAGSNKGGGTFVAVENTETPDGVVVFDGVGVKWRRLFFAGEVNVFDAGYTGSGDIAVYINKVNSAGYDCFIPCSGAFSSAIEIDFSKGSVRGANKCTLTEIEGIPGDYALKLFNSNTDYADRDSINANAILDGVAFQFSGTKKIALGGAGTGELSELRISNFGFISSAGLEFLDNSYRIIFDKGAISRSFNDTLIFNSPANSGEVINFNHCWMVDNGGPLKFKNGQFIFNGCSMPAGKKAGYFDPNIILEDNATVVYANGNIEFQPGQSFVAFVVGGSSRLSIKDSTLLTPSGYSAIPIVANDDAVVSLTNCSLPLYEQTEIAAGAAARQIIGGNSKKVMSYGCYPRAGFITANWDKGNIVSAYINSLSNGSGQFLNYSNWSLMQTGSGVVTAGTDTDVPNTIMFSRSLYVTVPSVGATADFYQDCLDCSPGRYFQLGFWAKNAVTSLASIEFFDKEGNSVQGKIPFNIPSVNAWGFYALVDIVPPGASKARVNFAVSGEVGTLHIHNAIYGLI
Physico‐chemical
properties
protein length:682 AA
molecular weight: 71805,35700 Da
isoelectric point:4,77637
aromaticity:0,10264
hydropathy:0,04164

Domains

Domains [InterPro]
Coil
24–51
Coil G3DSA:2.10.10.80 G3DSA:2.60.120.260
IPR040775
67–125
IPR040775
AIM50567.1
1 682
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM-ep3
[NCBI] 		1541883 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIM50567.1 [NCBI]
Genbank nucleotide accession
KM360178 [NCBI]
CDS location
range 27255 -> 29303
strand +
CDS
ATGCAGGTATCACTAGGCAGCGTTGACGGAGTTAAAGTTACGTTTCAATGTATCGATGTTCAACAGCAACTTAGCGAAGCAAGCAGCGCCGCAGATCGCGCAGAGGCTGCGGCTGAATCCATAGAATCGCAGTCCGCTAACATCGAATCAAACAGCCGTGAACAATGGCGCAGATCGCTGGCAGATGCAGGAATAACGCTTGTTAACGGTAGCTTTGAGGCGGGGGCGACAGTCAGTAACGCTTCTGAAGCTGTCTGGCATATTGCTGGTGGTCAGTGCTACACCTGGGGCGGAGTGATGCCGAAAGTAGTAACAGAAGGTTCAACACCTTCCGAAACAGGTGGCGTTTCCCCTGGAGCCTGGACTAGCGTTGGTAATAAATCCTTTAGCCAAATCCTGGCATCAAACAAGGGAATGAATCTAATCGGTGACGTTGATTCTGTAGCTCAGTTAGCATCTGTTTCTGGCGCATCTGTTGGCGATAAGATACTTGTCAGATCATACATCGCCGGTTCTAATAAAGGTGGTGGCACATTTGTTGCAGTTGAAAACACTGAAACGCCTGATGGCGTGGTAGTATTTGACGGCGTAGGTGTTAAATGGCGGAGACTTTTCTTTGCTGGTGAGGTAAATGTATTTGACGCCGGATATACGGGAAGCGGCGACATTGCTGTTTACATCAATAAAGTGAATTCCGCAGGATACGATTGTTTTATTCCATGTTCCGGTGCGTTTTCTTCCGCAATAGAAATTGATTTCAGCAAAGGAAGTGTAAGAGGCGCAAACAAATGCACACTTACAGAAATTGAAGGAATTCCAGGTGATTATGCGTTGAAGCTTTTCAACTCAAACACCGATTATGCTGACCGAGATTCAATTAACGCAAACGCCATATTGGATGGGGTCGCATTTCAGTTTTCTGGAACAAAAAAAATTGCGCTTGGCGGAGCGGGAACGGGTGAACTATCTGAATTGCGGATAAGTAACTTTGGTTTCATATCTTCTGCTGGATTAGAGTTTCTTGACAACTCTTACCGGATTATTTTCGATAAAGGCGCTATTTCACGCAGCTTTAATGACACACTCATATTTAATTCACCTGCGAACTCAGGAGAAGTGATTAACTTCAATCATTGCTGGATGGTAGACAATGGCGGGCCATTAAAATTCAAAAATGGGCAGTTTATATTTAATGGTTGCTCAATGCCTGCCGGGAAGAAGGCAGGATATTTTGACCCAAACATAATATTGGAGGACAACGCAACAGTTGTTTACGCAAATGGCAACATTGAATTTCAACCAGGTCAAAGTTTTGTTGCATTTGTGGTTGGCGGCAGTTCCAGATTGAGTATTAAAGATTCAACGCTGCTAACTCCATCTGGATATTCAGCTATACCAATCGTTGCAAATGATGATGCGGTCGTCTCGCTAACAAACTGTTCGCTTCCTCTATATGAGCAAACAGAGATTGCCGCTGGTGCTGCTGCGCGTCAAATTATTGGTGGGAACAGTAAGAAAGTAATGTCTTATGGTTGTTATCCCAGGGCTGGTTTTATAACAGCAAATTGGGATAAAGGTAACATTGTTAGTGCTTACATAAACTCATTGTCGAATGGCAGTGGACAATTTTTAAACTATTCAAACTGGAGTTTAATGCAAACCGGAAGCGGTGTTGTTACGGCAGGTACTGATACTGACGTACCAAATACAATCATGTTTTCAAGATCGCTATACGTAACTGTCCCTTCCGTTGGTGCGACAGCAGATTTCTACCAAGACTGCCTTGACTGTTCACCTGGCCGCTATTTTCAACTTGGGTTTTGGGCAAAGAACGCTGTGACATCACTGGCATCAATTGAATTCTTTGATAAAGAGGGCAACAGCGTTCAAGGGAAAATACCTTTTAATATACCTTCTGTGAATGCTTGGGGATTCTATGCGCTCGTAGACATTGTTCCGCCTGGTGCAAGTAAAGCAAGGGTTAACTTTGCAGTTTCTGGTGAAGTAGGTACACTGCATATTCATAACGCTATTTATGGCTTGATTTAA

Tertiary structure

PDB ID
98fc7b8408f37f8a4a959d4d9449e5820d5055991d0262c0f824e0fff5b91cb8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8118
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequencing and analysis of an Escherichia coli phage vB_EcoM-ep3 with a novel lysin, Lysep3 Lv,M., Wang,S., Yan,G., Sun,C., Feng,X., Gu,J., Han,W. and Lei,L. 2015 25842152 GenBank